Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32086
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   0.92 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.6  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 29  GKRIFQIGPVVSEPIRNKQTNKSFLFIIL 115
           GK    + PVVSEPI +K+     + + L
Sbjct: 218 GKFTVPLTPVVSEPIYDKKAMSDLMIVKL 246


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 276 FMKQFFHVYC 305
           F +QFFH YC
Sbjct: 418 FFQQFFHCYC 427


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 132 ISIVYTNIIKRKDLFVCLFRIGSE 61
           ISI YTN+      + CL +I ++
Sbjct: 176 ISIAYTNVSTDAFFYTCLIQIETQ 199


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +3

Query: 231 LNSNSYNFNSTPACIFMK 284
           +  N  N+N T  C F++
Sbjct: 42  IRKNGLNYNFTKKCYFLR 59


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory
          receptor candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 65 PKLLDRFEKFF 33
          P+LLDR++ F+
Sbjct: 40 PELLDRYDNFY 50


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory
          receptor candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 65 PKLLDRFEKFF 33
          P+LLDR++ F+
Sbjct: 40 PELLDRYDNFY 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,788
Number of Sequences: 336
Number of extensions: 1901
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)