Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32083
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0838 - 8185083-8185910                                           27   6.8  
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703...    27   8.9  
02_05_1192 + 34872348-34873739                                         27   8.9  

>08_01_0838 - 8185083-8185910
          Length = 275

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 31/116 (26%), Positives = 45/116 (38%)
 Frame = +3

Query: 45  DHRCSSRPCGYRHRCPPTEDYPKIVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALD 224
           DHR SS  CG  HR    +D       E DA        + E  N + R  T +   A  
Sbjct: 163 DHRDSSTTCGCHHRPEYADDSDDDDDDEEDAIKKAEEEESLE-HNELWREFTDKYIIASG 221

Query: 225 DDNKPHVIVAVRGSYSYTNTDGKPETITYXADETGYHAQGESIPQVASATS*TXKF 392
            D++   + A+   Y  T  D   ET T   D+   H + E   +  + ++   KF
Sbjct: 222 YDDRFKEMDAIGEVYFDTTLD--EETRTDMIDKLWRHIEKELSDRARAVSTGKFKF 275


>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
            32870640-32870761,32873139-32873167,32873586-32873891,
            32873977-32874035,32874148-32874279,32874414-32874455,
            32874560-32875093,32875189-32875379,32875538-32876027,
            32876273-32876335,32876704-32876805,32876895-32877215,
            32877294-32877386,32877484-32877585,32877718-32877822,
            32877933-32878066,32878429-32878612,32879226-32879357,
            32879447-32879559,32879628-32879709,32880328-32881992
          Length = 1746

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 432  QSCIKASSLKSIQGIXKFSSWRRRPEE*IHPEHGIQSRQ 316
            ++ +   S K  +G    S  RR  +  +HP HG+ S+Q
Sbjct: 1701 KATVVPKSEKDTEGFTVVSKRRRSKQHFVHPIHGLYSQQ 1739


>02_05_1192 + 34872348-34873739
          Length = 463

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 401 DLSDEALIQDCVAKHPPHSLVTRY 472
           DL+D    +DC+  +PP +LV  Y
Sbjct: 418 DLADAGAWEDCIHDYPPANLVNPY 441


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,731,798
Number of Sequences: 37544
Number of extensions: 234043
Number of successful extensions: 612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)