Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32083
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende...    30   5.5  
D31891-1|BAA06689.2| 1300|Homo sapiens KIAA0067 protein.               29   7.3  
BC028671-1|AAH28671.1| 1290|Homo sapiens SET domain, bifurcated ...    29   7.3  
AL590133-4|CAI13328.1| 1291|Homo sapiens SET domain, bifurcated ...    29   7.3  

>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
            calcium channel protein.
          Length = 2472

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 51   RCSSRPCGYRHRCPPTEDYPKIVRSEFDASPDGAYNYNFETSNGIVRS 194
            R  S P G   +CPP   Y +++R +   + D   ++N  T   ++R+
Sbjct: 1857 RVMSPPLGLGKKCPPGVAYKRLLRMDLPVADDNTVHFN-STLMALIRT 1903


>D31891-1|BAA06689.2| 1300|Homo sapiens KIAA0067 protein.
          Length = 1300

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +3

Query: 171  TSNGIVRSETGELKEA----LDDDNKPHVIVAVRGSYSYTNTDGKPETITYXADETGYH 335
            +++G+   + G++K+A     DD NK  V+     +Y Y  +  KPE +     +T  H
Sbjct: 1034 STSGLGIKDEGDIKQAKKEDTDDRNKMSVVTESSRNYGYNPSPVKPEGLRRPPSKTSMH 1092


>BC028671-1|AAH28671.1| 1290|Homo sapiens SET domain, bifurcated 1
            protein.
          Length = 1290

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +3

Query: 171  TSNGIVRSETGELKEA----LDDDNKPHVIVAVRGSYSYTNTDGKPETITYXADETGYH 335
            +++G+   + G++K+A     DD NK  V+     +Y Y  +  KPE +     +T  H
Sbjct: 1025 STSGLGIKDEGDIKQAKKEDTDDRNKMSVVTESSRNYGYNPSPVKPEGLRRPPSKTSMH 1083


>AL590133-4|CAI13328.1| 1291|Homo sapiens SET domain, bifurcated 1
            protein.
          Length = 1291

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +3

Query: 171  TSNGIVRSETGELKEA----LDDDNKPHVIVAVRGSYSYTNTDGKPETITYXADETGYH 335
            +++G+   + G++K+A     DD NK  V+     +Y Y  +  KPE +     +T  H
Sbjct: 1025 STSGLGIKDEGDIKQAKKEDTDDRNKMSVVTESSRNYGYNPSPVKPEGLRRPPSKTSMH 1083


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,481,826
Number of Sequences: 237096
Number of extensions: 1188184
Number of successful extensions: 3064
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)