Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32081
         (332 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1WKV9 Cluster: Transcriptional regulator, LysR family;...    33   1.7  
UniRef50_Q8PYD4 Cluster: Glutathione-regulated potassium-efflux ...    32   2.2  
UniRef50_Q9TXV8 Cluster: Abc transporter family protein 4; n=2; ...    31   3.9  
UniRef50_A3IFP1 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q1QBE2 Cluster: Regulator of chromosome condensation pr...    31   6.7  
UniRef50_Q39AK8 Cluster: Transcriptional regulator, LysR family;...    30   8.9  

>UniRef50_A1WKV9 Cluster: Transcriptional regulator, LysR family;
           n=1; Verminephrobacter eiseniae EF01-2|Rep:
           Transcriptional regulator, LysR family -
           Verminephrobacter eiseniae (strain EF01-2)
          Length = 323

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = -2

Query: 238 FLTVLLSHFFQFGRAAKSLSPTKPAVRNFVPKIQYLL 128
           F +VL+    QFGRAAK L+ T+PA+ N + +++ LL
Sbjct: 20  FFSVLVEEG-QFGRAAKRLAITQPALSNAIKQMEKLL 55


>UniRef50_Q8PYD4 Cluster: Glutathione-regulated potassium-efflux
           system protein; n=3; Methanosarcina|Rep:
           Glutathione-regulated potassium-efflux system protein -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 695

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 326 KDKGIIPYSLVXATVAPAHVSFXGFFPRIFSYGFTITF-FSVRSRSKIP 183
           +D  I+P  L+   +A + +SF G F  IF  G  I F F + SR  +P
Sbjct: 154 QDLAIVPLILITPILAGSSISFDGAFSNIFFKGSLIIFVFILSSRFLVP 202


>UniRef50_Q9TXV8 Cluster: Abc transporter family protein 4; n=2;
           Caenorhabditis|Rep: Abc transporter family protein 4 -
           Caenorhabditis elegans
          Length = 1802

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 240 FFLRFYYHIFFSSVAQQNPYPL 175
           + L ++++ FFSS+ Q NPYPL
Sbjct: 434 WMLLYFWYAFFSSIDQTNPYPL 455


>UniRef50_A3IFP1 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 1779

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = -1

Query: 224 TITFFSVRSRSKIPIPYQACRKELRSKNTIPAYLYTELHLFH*ISRKVID 75
           T+T   ++  +++   Y A    L+SKNTIP++++ +  + H ++ K ID
Sbjct: 567 TLTCLDIKIPAEVLQAYDAFLAVLKSKNTIPSFVFYDEEV-HEVAEKYID 615


>UniRef50_Q1QBE2 Cluster: Regulator of chromosome condensation
           precursor; n=1; Psychrobacter cryohalolentis K5|Rep:
           Regulator of chromosome condensation precursor -
           Psychrobacter cryohalolentis (strain K5)
          Length = 558

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 92  KFNETNVVQYTNKQVLYFWNEVPYGRLGRG 181
           KFN+ + +   +K  +Y W    YG+LGRG
Sbjct: 186 KFNQNHSLAIDDKGQVYSWGNDAYGQLGRG 215


>UniRef50_Q39AK8 Cluster: Transcriptional regulator, LysR family;
           n=7; Burkholderia cepacia complex|Rep: Transcriptional
           regulator, LysR family - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 303

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = -2

Query: 229 VLLSHFFQFGRAAKSLSPTKPAVRNFVPKIQYLL 128
           V+L+H   F +AA++LS T+PA+   + +I++LL
Sbjct: 21  VVLAHARSFTQAAQALSLTQPALTASIRQIEFLL 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,628,357
Number of Sequences: 1657284
Number of extensions: 5078907
Number of successful extensions: 11111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11105
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)