Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32081
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   5.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   5.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   5.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   5.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   5.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 222 YHIFFSSVAQQNPYPLPSLP 163
           YH F + +A   P P P  P
Sbjct: 164 YHQFLAIIACMGPPPQPEPP 183


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 53  Y*RNTAIYQ*PFSKFNETNVVQYTNKQVLYFWNE 154
           Y RNT +     ++ +      Y N Q  Y++N+
Sbjct: 330 YVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNK 363


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 53  Y*RNTAIYQ*PFSKFNETNVVQYTNKQVLYFWNE 154
           Y RNT +     ++ +      Y N Q  Y++N+
Sbjct: 278 YVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNK 311


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 1   VYRPGVANLD*EPXIYCLLTKYCD 72
           ++RP   NLD    I+    KY D
Sbjct: 132 LHRPDTQNLDLPSFIHVFPDKYVD 155


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 113  VQYTNKQVLYFWNEV 157
            V Y N+    FWNE+
Sbjct: 1185 VHYLNRNEETFWNEL 1199


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 113  VQYTNKQVLYFWNEV 157
            V Y N+    FWNE+
Sbjct: 1185 VHYLNRNEETFWNEL 1199


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 110 VVQYTNKQVLYFWNEV 157
           +V +TN + LY  NE+
Sbjct: 316 IVSFTNSEGLYAINEI 331


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 110 VVQYTNKQVLYFWNEV 157
           +V +TN + LY  NE+
Sbjct: 316 IVSFTNSEGLYAINEI 331


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 92  KFNETNVVQYTNKQV 136
           K N  NVV  TN+++
Sbjct: 87  KLNNNNVVSSTNQEI 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,519
Number of Sequences: 336
Number of extensions: 1513
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)