Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32081
         (332 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018     27   3.7  
01_06_0564 - 30271749-30271759,30271847-30271922,30272878-302729...    26   8.5  

>10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018
          Length = 1040

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 223 LSHFFQFGRAAKSLSPTKPA-VRNFVPKIQYLLICILNYI 107
           LS   Q G     L  T P+ + N +PKIQYL++  LN++
Sbjct: 247 LSSLVQIGVEMNELDGTLPSDLGNALPKIQYLILA-LNHL 285


>01_06_0564 -
           30271749-30271759,30271847-30271922,30272878-30272919,
           30273065-30273206,30273278-30273339,30273460-30273526,
           30273644-30273834
          Length = 196

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 229 VLLSHFFQFGRAAKSLSPTKPAVRNFVPKIQ 137
           +LL  F   G+    LSPT P+VR FV + +
Sbjct: 43  LLLLLFSASGKLYHFLSPTVPSVREFVERYE 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,800,550
Number of Sequences: 37544
Number of extensions: 132879
Number of successful extensions: 256
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)