Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32081
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport...    31   0.15 
AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical p...    26   7.5  
U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical pr...    26   7.5  
AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical ...    26   7.5  
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    25   10.0 
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      25   10.0 
AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical ...    25   10.0 

>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
           family protein 4 protein.
          Length = 1802

 Score = 31.5 bits (68), Expect = 0.15
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 240 FFLRFYYHIFFSSVAQQNPYPL 175
           + L ++++ FFSS+ Q NPYPL
Sbjct: 434 WMLLYFWYAFFSSIDQTNPYPL 455


>AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical
           protein T28F2.4a protein.
          Length = 748

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 86  FSKFNETNVVQYTNKQVLYFWNEVPYGRLG 175
           F KF ++NV+    KQ  YF N     RLG
Sbjct: 321 FDKFYQSNVLVVRRKQPTYFGNLFSTARLG 350


>Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical
           protein F13G3.1 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 208 QFGRAAKSLSPTKPAVRNFVPKIQYLLICI 119
           Q G +   LSPT P   +F+P IQ  L+ +
Sbjct: 281 QLGSSPLLLSPTLPVTPSFLPDIQSALLSL 310


>U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical
           protein C45G9.10b protein.
          Length = 805

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 230 GFTITFFSVRSRSKIPIPYQACRKELRSKNTIPAYLYTELHLFH 99
           G     F   S + I IP+   R EL  +N   AY Y  +  ++
Sbjct: 186 GIFYRIFKHDSNTIITIPFDGIRNELSEENLRLAYCYDTMDFYN 229


>U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical
           protein C45G9.10a protein.
          Length = 971

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 230 GFTITFFSVRSRSKIPIPYQACRKELRSKNTIPAYLYTELHLFH 99
           G     F   S + I IP+   R EL  +N   AY Y  +  ++
Sbjct: 352 GIFYRIFKHDSNTIITIPFDGIRNELSEENLRLAYCYDTMDFYN 395


>AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical
           protein Y67H2A.1 protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 198 AQQNPYPLPSLP*GTSFQKYNTCL 127
           AQ NP P   LP  +SF ++NT +
Sbjct: 600 AQANPVPDKYLPSNSSFPQFNTAI 623


>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
            guidance protein 2,isoform a protein.
          Length = 2886

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 166  AVRNFVPKIQYLLICILNYIC 104
            A+R F+   Q  + C+L YIC
Sbjct: 2100 AMRTFMKDAQQFMKCVLQYIC 2120


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 166  AVRNFVPKIQYLLICILNYIC 104
            A+R F+   Q  + C+L YIC
Sbjct: 2128 AMRTFMKDAQQFMKCVLQYIC 2148


>AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical
           protein T27B7.2 protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 211 FQFGRAAK---SLSPTKPAVRNFVPKIQYLLIC 122
           FQ+GR        +P  P++ NFV + ++LL C
Sbjct: 111 FQYGRDLNLPADDNPLVPSISNFVGRPEFLLFC 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,037,802
Number of Sequences: 27780
Number of extensions: 129084
Number of successful extensions: 298
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)