Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32081
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   3.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   3.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   5.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   9.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   9.1  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 250 FHGFFLTVLLSHFFQFGRA 194
           +H FF+ V+   F  FG A
Sbjct: 5   YHFFFILVITLIFLYFGEA 23


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 120 IQISRYCIFGTKFLTA 167
           +++ RYC+FG    TA
Sbjct: 533 LKMPRYCLFGDSVNTA 548


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 119 YTNKQVLYFWN 151
           YT + V+Y WN
Sbjct: 153 YTKRDVIYKWN 163


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 86  FSKFNETNVVQYTNKQ 133
           +  FN+TNV QY   Q
Sbjct: 376 YPTFNQTNVDQYLYNQ 391


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 146 KNTIPAYLYTELHLFH 99
           KN    Y++T LHL +
Sbjct: 40  KNRTGRYMFTYLHLLY 55


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 152 EVPYGRLGRG*GFCCATELK 211
           E PY     G GF C+ +LK
Sbjct: 201 EKPYVCKACGKGFTCSKQLK 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,086
Number of Sequences: 438
Number of extensions: 1566
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)