Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32079
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0154 + 18667338-18670110,18670233-18670561,18670914-186709...    29   2.9  

>01_05_0154 +
           18667338-18670110,18670233-18670561,18670914-18670939,
           18671678-18671783
          Length = 1077

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 24/96 (25%), Positives = 35/96 (36%)
 Frame = -3

Query: 346 LVRAHRHLPRKMRQATLQXINS*DPXV*LQRLPYPSDRKRITAXTAANKAGSVVPTRAEL 167
           L +  +   RK   + L  +N   P V    L   +D         A K GSV      L
Sbjct: 698 LFKGRKQTDRKNATSDLM-LNEKYPRVSYHELFEATDGFAPANLIGAGKYGSVYRGNLSL 756

Query: 166 HTRVPTIICTKVFRLLHRKXLTAHFPSCFPVVHAKH 59
            + V  ++  KVF L H     +    C  + + KH
Sbjct: 757 PSAVNVVVAVKVFTLQHASSSRSFMAECEALRNVKH 792


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,155,215
Number of Sequences: 37544
Number of extensions: 215251
Number of successful extensions: 372
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)