Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32079
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   1.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   7.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   7.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.9  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 340 RAHRHLPRKMRQATLQXIN 284
           +A RHLPR M+ +T +  N
Sbjct: 79  KALRHLPRSMQDSTKKLFN 97


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 281 LRSXSLVTTAALPFRPQTHY 222
           L    L+T+  L + P+THY
Sbjct: 29  LSKYQLITSTTLNWLPRTHY 48


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 343 LRQ*NNKILGTTLNATXNQYFFNS 414
           L++ +NK+ G  L+   +  ++NS
Sbjct: 245 LKEVDNKVYGMALSPVTHNLYYNS 268


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 337 AHRHLPRKMRQ 305
           A+R LPR+MRQ
Sbjct: 400 AYRKLPREMRQ 410


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 337 AHRHLPRKMRQ 305
           A+R LPR+MRQ
Sbjct: 368 AYRKLPREMRQ 378


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 120  NNLNTLVQIMVGTLVXSSARVGTTDP 197
            +N NT  +I  GT++ S     T DP
Sbjct: 1659 SNYNTCDRIKRGTVIRSIRSHSTWDP 1684


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 76  QENRMENALLXICGAT 123
           Q+   ENA+  IC AT
Sbjct: 223 QQGNYENAVSHICNAT 238


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 76  QENRMENALLXICGAT 123
           Q+   ENA+  IC AT
Sbjct: 223 QQGNYENAVSHICNAT 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,471
Number of Sequences: 438
Number of extensions: 2331
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)