Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32075
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    53   1e-07
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    39   0.002
At3g60860.1 68416.m06808 guanine nucleotide exchange family prot...    29   2.5  
At2g37960.1 68415.m04659 expressed protein                             28   4.3  
At5g28482.1 68418.m03463 hypothetical protein similar to At2g066...    27   7.5  
At2g06630.1 68415.m00736 hypothetical protein similar to At2g121...    27   7.5  
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p...    27   9.9  

>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
 Frame = +3

Query: 126 NLXDDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEF 305
           ++ +  NV+ SP+ + +LLSL  +G+   +KEEI   L        +     +     E 
Sbjct: 25  DVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTER 84

Query: 306 DPKFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINFSA-PKNAADIINRWADEQTQ 479
               L+ A+ +++     L  +F     N +++    ++F+  P    D +N WAD  T 
Sbjct: 85  SDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTN 144

Query: 480 GHIKTPVSED 509
           G IK  +S D
Sbjct: 145 GLIKQILSRD 154


>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
 Frame = +3

Query: 144 NVIASPLGVMLLLSLYESGAGAQSKEEIRE--ILGGGEAQES--SHTYGLLNQRYAEFDP 311
           N++ SP+ + +LL L  +G+   +KE+I    +L   +   +  + T  +      E   
Sbjct: 30  NLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALNDGMERSD 89

Query: 312 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-PKNAADIINRWADEQTQGH 485
             L+ A  +++        +F     N + +  + ++F+  P    + +N WA+  T G 
Sbjct: 90  LHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGL 149

Query: 486 IKTPVSEDKI 515
           IK  +S+D I
Sbjct: 150 IKEILSDDSI 159


>At3g60860.1 68416.m06808 guanine nucleotide exchange family protein
           similar to guanine nucleotide exchange factor, Homo
           sapiens, GI:5456754; contains Pfam profile PF01369: Sec7
           domain
          Length = 1793

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 204 GAQSKEEIREILGG----GEAQESSHTYGLLNQRYAEFDPKFLTVANKIYV 344
           G +  E IR  L G    GEAQ+         +RY + +PK  T A+  YV
Sbjct: 693 GMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYV 743


>At2g37960.1 68415.m04659 expressed protein
          Length = 480

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 339 YVSDQYKLADAFSRTANLFRSEVDNINFSAP 431
           ++ D+Y   + FS+T +LFRSE  ++  ++P
Sbjct: 26  FLVDRYLCDNRFSKTRSLFRSEASSLISNSP 56


>At5g28482.1 68418.m03463 hypothetical protein similar to At2g06630,
           At2g12120, At1g45090, At2g05470
          Length = 231

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 224 DKGNPWGR--GGSRVITHIRIIKSALRRIRPEI 316
           D GNP        RV+TH R IK A+  +RP +
Sbjct: 87  DAGNPTAMYFEALRVLTHERDIKGAINLLRPHV 119


>At2g06630.1 68415.m00736 hypothetical protein similar to At2g12120,
           At1g45090, At2g05470, At5g28482
          Length = 231

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 224 DKGNPWGR--GGSRVITHIRIIKSALRRIRPEI 316
           D GNP        RV+TH R IK A+  +RP +
Sbjct: 87  DAGNPTATYFEALRVLTHERDIKGAINLLRPHV 119


>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
           protein weak similarity to SP|Q00765 Polyposis locus
           protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
           profile PF03134: TB2/DP1, HVA22 family
          Length = 315

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 267 VMTLEPPLPQGFPLSLPWTVHRLQTRTRKAAASRREETLS 148
           ++T EP  P+  PLS P    +LQT T++A AS  +  L+
Sbjct: 193 LVTKEPISPK--PLSSPRKQQQLQTETKEAKASVSQTKLT 230


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,448,341
Number of Sequences: 28952
Number of extensions: 230672
Number of successful extensions: 728
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)