Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32074
(516 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 25 0.30
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 1.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 4.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 6.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.6
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 8.6
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 8.6
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 21 8.6
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 25.4 bits (53), Expect = 0.30
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +3
Query: 12 YVILYVPCAILKFY------SLKRIIIF-HMVFLFKHYMF*RERFMRNLGGPI 149
+V Y P A + FY S++ III H V + K + F E MRN G I
Sbjct: 109 FVHFYYPVATMSFYVLNFFGSIQFIIISKHWVTIMKEWSF-MEMSMRNYGSSI 160
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 259 YLYNKQLSLFTNK*YH*IYKNPYPRK 182
YLY +Q S T Y+ PYPR+
Sbjct: 23 YLYWQQTSNLTTSKLLYTYRQPYPRQ 48
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 353 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 487
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 353 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 487
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 353 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 487
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 353 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 487
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 353 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 487
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 364 ILPVVICLSQRLSHACLS 417
I P VI R+SH C+S
Sbjct: 71 IRPCVISRQLRVSHGCVS 88
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +3
Query: 318 RRFSFRANEKESSLVDPASSYMLVSKIKPCMSQC 419
R S++ ++ V Y+L+++ PC +C
Sbjct: 15 RNLSYKVMYNGNNNVTDLVEYVLLNEDNPCARKC 48
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 393 LRQAYNYWQDQPGSSLF 343
+R A+N QPG+S+F
Sbjct: 416 IRHAFNEETVQPGNSVF 432
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 20.6 bits (41), Expect = 8.6
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 39 ILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNYPF 167
+L + + ++I +F F + E + +L PIL N F
Sbjct: 527 LLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTF 569
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 20.6 bits (41), Expect = 8.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 3 SVVYVILYVPCAILKFYSLKRIIIFHMVFLFKHYMF 110
SVVYV++ L + K +++ + F+ K +F
Sbjct: 267 SVVYVLILYILESLLYMVTKLVVVTFLKFIKKIQIF 302
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 20.6 bits (41), Expect = 8.6
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 39 ILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNYPF 167
+L + + ++I +F F + E + +L PIL N F
Sbjct: 252 LLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTF 294
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,577
Number of Sequences: 336
Number of extensions: 1895
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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