Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32071
         (305 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   2.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   5.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   5.1  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 137 RMCGRFSSGVH 169
           ++CG FSSG H
Sbjct: 39  KVCGDFSSGKH 49


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 137 RMCGRFSSGVH 169
           ++CG FSSG H
Sbjct: 39  KVCGDFSSGKH 49


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 101 FYWP*IYRELNR 66
           +YWP +YR + +
Sbjct: 156 YYWPNMYRTIKK 167


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 120 RTMICFLLLAMNLS 79
           +T + FLLLA+N+S
Sbjct: 67  QTCLDFLLLALNIS 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,486
Number of Sequences: 336
Number of extensions: 1458
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)