Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32071
(305 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 33 0.009
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 32 0.022
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.088
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 30 0.088
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 29 0.12
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 29 0.20
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 28 0.36
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 28 0.36
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 0.47
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 0.47
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 27 0.62
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 0.82
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 2.5
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 25 3.3
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 3.3
SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces p... 24 4.4
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 24 5.8
SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like factor|Schizosacchar... 24 5.8
SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces p... 24 5.8
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 23 7.7
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 23 7.7
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 33.1 bits (72), Expect = 0.009
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 105 NISLYAEIIAGACAGGSQVVFTNPLEIVKIRLQVA---GEYS-RGDQSEGLVRRQGPXAL 272
NI AGA AG S+V+ PL++VK R+Q++ +Y+ D + +V+ +GP L
Sbjct: 5 NIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRL 64
Score = 30.3 bits (65), Expect = 0.067
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 126 IIAGACAGGSQVVFTNPLEIVKIRLQ 203
I+ G+CAG ++ P E++KIRLQ
Sbjct: 108 ILTGSCAGFTETFVVVPFELMKIRLQ 133
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 31.9 bits (69), Expect = 0.022
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 105 NISLYAEIIAGACAGGSQVVFTNPLEIVKIRLQ 203
+I ++ E+I G+ AG T PL++ K RLQ
Sbjct: 211 DIGVFRELITGSLAGAGAGFLTTPLDVAKTRLQ 243
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.088
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 EIIAGACAGGSQVVFTNPLEIVKIRLQV-AGEYSRGDQSEGLVRRQGPXALRTVQGGEGL 299
+ IAG AG + + PL++VK R Q YS G +V ++RT+ EG+
Sbjct: 8 DAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGI 67
Score = 27.5 bits (58), Expect = 0.47
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 123 EIIAGACAGGSQVVFTNPLEIVKIRL 200
+I + AG + V TNP+ +VK RL
Sbjct: 136 QIFSAVIAGAASVTLTNPIWVVKTRL 161
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 29.9 bits (64), Expect = 0.088
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 108 ISLYAEIIAGACAGGSQVVFTNPLEIVKIRLQVAGEYSRGDQSEGLVRRQGPXALRTVQG 287
+S + + AG CAG + + P++ +K RLQ G + + G+ R G + + G
Sbjct: 80 MSFFEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGFVKNGGFHGVYRGLGSILVGSAPG 139
Score = 27.1 bits (57), Expect = 0.62
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 129 IAGACAGGSQVVFTNPLEIVKIRLQVA 209
I+G+ AGG T P ++VK R+ +
Sbjct: 263 ISGSIAGGIAAALTTPFDVVKTRIMTS 289
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 29.5 bits (63), Expect = 0.12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 129 IAGACAGGSQVVFTNPLEIVKIRL 200
++G+ AG V FT PLE++++RL
Sbjct: 121 LSGSLAGTCSVFFTYPLELIRVRL 144
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 28.7 bits (61), Expect = 0.20
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 126 IIAGACAGGSQVVFTNPLEIVKIRLQV 206
IIAG AG ++ T P E K RLQ+
Sbjct: 21 IIAGGVAGAIEISITYPAEFAKTRLQL 47
Score = 24.2 bits (50), Expect = 4.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 93 PIKGNISLYAEIIAGACAGGSQVVFTNPLEIVKIRLQ 203
P +S + G+ AG V T P++ VK R+Q
Sbjct: 196 PPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRMQ 232
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.9 bits (59), Expect = 0.36
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 120 AEIIAGACAGGSQVVFTNPLEIVKIRLQ 203
+ IAG AG + T PL++VK RLQ
Sbjct: 50 SHFIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 25.0 bits (52), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 126 IIAGACAGGSQVVFTNPLEIVKIRLQV 206
++A A AG TNP+ +VK RLQ+
Sbjct: 166 LMAAAIAGVITSAATNPIWLVKTRLQL 192
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.9 bits (59), Expect = 0.36
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 111 SLYAEIIAGACAGGSQVVFTNPLEIVKIRLQ 203
S + +AG G +QV+ P + VK+RLQ
Sbjct: 16 SFTKDFLAGVSGGVAQVLVGQPFDCVKVRLQ 46
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 129 IAGACAGGSQVVFTNPLEIVKIRLQV 206
++GA +G + P+E V+IRLQ+
Sbjct: 117 VSGAISGLANSFLVGPVEHVRIRLQI 142
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 0.47
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 120 AEIIAGACAGGSQVVFTNPLEIVKIRLQVAGEYS 221
+ II+G +G T PL++VK LQ G S
Sbjct: 206 SHIISGGLSGAIASSLTTPLDVVKTLLQTRGSSS 239
Score = 27.1 bits (57), Expect = 0.62
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 114 LYAEIIAGACAGGSQVVFTNPLEIVKIRLQVAGEYSR 224
+YA ++AGA +G + P++ +K R+Q+ SR
Sbjct: 19 MYAHLLAGAFSGILEHSVMYPVDAIKTRMQMLNGVSR 55
Score = 26.6 bits (56), Expect = 0.82
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 120 AEIIAGACAGGSQVVFTNPLEIVKIRLQV 206
A +AGACA F P +++K R+Q+
Sbjct: 115 ASALAGACAITISDAFMTPFDVIKQRMQL 143
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 0.47
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 129 IAGACAGGSQVVFTNPLEIVKIRLQVAGEYSRGDQSEGLV 248
+AG AG +F P++ +K R+Q + SRG + ++
Sbjct: 233 LAGGMAGSVAQMFIYPVDTLKFRIQ-CSDLSRGQHGKSII 271
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 0.62
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 123 EIIAGACAGGSQVVFTNPLEIVKIRLQVA 209
+ IAG AG + + +PL++ KI++Q +
Sbjct: 3 QAIAGLAAGTASTLIMHPLDLAKIQMQAS 31
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 102 GNISLYAEIIAGACAGGSQVVFTNPLEIVKIRL 200
G IS+ + + AG TNP+ +VK R+
Sbjct: 94 GEISVLQTLCSSGFAGCIVAALTNPIWVVKSRI 126
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 0.82
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 120 AEIIAGACAGGSQVVFTNPLEIVKIRLQ-VAGEYSRGDQSE 239
A IAGA A +P+E+ + R+Q V G Y G E
Sbjct: 138 AAAIAGASARTISATIVSPIELFRTRVQAVGGHYPPGHARE 178
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.0 bits (52), Expect = 2.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 302 RQAFAPLYSPKSPRSLTTDQAFTLVPPAILAGDLKTN-FDNFQGIREHHLRTA 147
RQ F L S S +SLT A + + P + GD + N F+N I+ H + A
Sbjct: 1421 RQEFIGLLS-YSIKSLTMVDAISDMQPLLYEGDEEANFFNNILHIQLHRRKRA 1472
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 294 LRPLVQSEEPXVLDDGPGLHFGPPG--YTRRR 205
++ +V ++ VLD G + FG P YT+RR
Sbjct: 1383 IKTIVDYDKVLVLDSGKTVEFGSPKSLYTQRR 1414
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 24.6 bits (51), Expect = 3.3
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 126 IIAGACAGGSQVVFTN---PLEIVKIRLQVA 209
+IA C+ VV T PL+IVK R QVA
Sbjct: 174 VIAPICSALGTVVATTISTPLDIVKTRYQVA 204
>SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 509
Score = 24.2 bits (50), Expect = 4.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 166 SRIPWKLSKFVFKSPASIAGGTKVKAWSVVKD 261
SRIPWK + K PA G V V D
Sbjct: 86 SRIPWKRAYLYVKRPALYIPGETVLVEQVYVD 117
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 111 SLYAEIIAGACAGGSQVVFT 170
S+ A+I+ G AGG++VV T
Sbjct: 647 SIGAQIVEGLLAGGAKVVVT 666
>SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like
factor|Schizosaccharomyces pombe|chr 3|||Manual
Length = 203
Score = 23.8 bits (49), Expect = 5.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 305 RRQAFAPLYSPKSPRS 258
+R AFA + SPK PR+
Sbjct: 183 KRSAFADIISPKRPRT 198
>SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 210 GEYSRGDQSEGLVRRQGPXALRTVQGGEGLP 302
GE+ +G+++ ++R +GP +GG G+P
Sbjct: 460 GEFKKGEKTVVIIRFEGP------KGGPGMP 484
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 23.4 bits (48), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 196 VFKSPASIAGGTKVKAWSVVKDLGLFGLYKGAKACL 303
V SP AG + +W+ ++ +GL GL +KA L
Sbjct: 812 VSSSPFGSAGILPI-SWAYMRMMGLAGLRDASKAAL 846
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 23.4 bits (48), Expect = 7.7
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 120 AEIIAGACAGGSQVVFTNPLEIVKIRLQVAGEYSRGDQSEGLVRRQGPXALRTVQ 284
A+ AGAC GG V T ++ G Y G+Q L Q P L+++Q
Sbjct: 337 AKAAAGACCGGYDGV-TCGVQWWWNNDTWDGLYGLGEQMSALEAIQAPLLLKSLQ 390
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,240,757
Number of Sequences: 5004
Number of extensions: 22498
Number of successful extensions: 67
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 77794588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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