Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32070
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 34 0.075
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 33 0.100
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 31 0.53
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 31 0.53
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 31 0.53
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 31 0.70
03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949... 31 0.70
08_01_0412 + 3675767-3676069,3676627-3677877 30 0.93
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 30 1.2
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 29 1.6
02_04_0500 + 23500769-23500951,23501200-23501285,23501442-235014... 29 1.6
02_01_0315 - 2111095-2111241,2111496-2111579,2111803-2111883,211... 29 2.1
02_01_0050 - 352017-354272 29 2.1
02_05_0395 - 28596957-28597400,28598506-28598586,28600049-28600270 29 2.8
02_02_0061 + 6468190-6471046,6471318-6471736 28 3.7
07_03_0554 - 19401092-19402540 28 5.0
07_01_0544 + 4012457-4012796,4012897-4013069 28 5.0
02_02_0138 + 7114949-7115656,7116388-7116435,7116830-7117988,711... 28 5.0
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 28 5.0
02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 27 6.5
04_03_1015 - 21734381-21736534 27 8.7
04_03_0515 + 16698589-16701066 27 8.7
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 33.9 bits (74), Expect = 0.075
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
++VSAGAI SPQLLLLSG
Sbjct: 279 IIVSAGAIGSPQLLLLSG 296
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 33.5 bits (73), Expect = 0.100
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
+++SAGAI SPQLLLLSG
Sbjct: 293 IIISAGAIGSPQLLLLSG 310
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
V+VSAG + SPQLL+LSG
Sbjct: 280 VIVSAGTLGSPQLLMLSG 297
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
V++SAG++ SPQLLLLSG
Sbjct: 302 VILSAGSLGSPQLLLLSG 319
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 31.1 bits (67), Expect = 0.53
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
+++SAGA+ SPQLL+LSG
Sbjct: 269 IILSAGALGSPQLLMLSG 286
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
+++SAGA+ SPQLL+LSG
Sbjct: 276 IILSAGAMGSPQLLMLSG 293
>03_02_0764 +
10990220-10992410,10992809-10993616,10994734-10994968,
10995028-10995169,10997365-10997444,10997636-10997776
Length = 1198
Score = 30.7 bits (66), Expect = 0.70
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 229 FLHNTGDLIDTSPHRVIAFENTTDPNSPASDMQYHYLIFPPSSYNLLD 372
+ NT DL+D SPH + +++ P S L+F PSS LL+
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLE 183
>08_01_0412 + 3675767-3676069,3676627-3677877
Length = 517
Score = 30.3 bits (65), Expect = 0.93
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 352 SSYNLLDMFRKHGLSEEVHDKFREMNENKY--TMLVYNTLLK 471
+++ +L+ F ++G F E+NE+KY VYNTLLK
Sbjct: 437 TTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLLK 478
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 8 VVVSAGAINSPQLLLLSG 61
V+V+AG + SPQLL+LSG
Sbjct: 275 VIVTAGTLGSPQLLMLSG 292
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 334 YLIFPPSSYNLLDMFRKHGLSEEVHDKFREMNENKYTMLVYNTL 465
Y++ + YN+ H S++++DK+RE E T +V +L
Sbjct: 42 YMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPSL 85
>02_04_0500 +
23500769-23500951,23501200-23501285,23501442-23501490,
23501560-23501746,23502214-23502371,23502447-23502515,
23502692-23502750,23503140-23503176,23503493-23503564,
23503694-23503841,23504124-23504219,23505042-23505181,
23505304-23505419,23505614-23505659,23505747-23505923
Length = 540
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 HNTGDLIDTSPHRVIAFENTTDPNSPASDMQYHYLIFPPSSY-NLLDMFRKHGLSEEVH 408
+N+G+ S + I+ T+ N P S + YL PPS Y ++ M R + ++ H
Sbjct: 114 YNSGEGF-ASLNNAISENETSKNNKPGSSRRLFYLALPPSVYPSVCKMIRSYCMNPSSH 171
>02_01_0315 -
2111095-2111241,2111496-2111579,2111803-2111883,
2112133-2112310,2112447-2112623,2112688-2112734,
2112845-2112901,2113339-2113437,2113696-2113818,
2113895-2114017,2114241-2114264,2115096-2115209,
2115315-2115503,2115691-2115857,2116846-2116930,
2117698-2117778,2118239-2118424,2119266-2119314,
2119777-2119810,2120087-2120153,2120198-2120419
Length = 777
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 448 AWCIC--SRSFHGTYRGLLRLNRAYGTCPISCRSLEGILSSGTAC 320
+W +C SR++ G +GL+ R Y CP ++ +LS C
Sbjct: 618 SWAVCFTSRTWFGA-KGLIAAGRTYENCPAIRKACNFLLSKELPC 661
>02_01_0050 - 352017-354272
Length = 751
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 364 LLDMFRKHGLSEEVHDKFREMNENKYTMLVYNTLL 468
L+DM+ K GL + F+EM T+++YNTL+
Sbjct: 187 LVDMYAKMGLIRDARRVFQEMEAK--TVVMYNTLI 219
>02_05_0395 - 28596957-28597400,28598506-28598586,28600049-28600270
Length = 248
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 12 SFPLVLLTPHSCCCSPGIGPR 74
S P+ +L P SCCC G G R
Sbjct: 207 SLPMPMLPPSSCCCCFGPGER 227
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 352 SSYNLLDMFRKHGLSEEVHDKFREMNENKYTMLVYNTLLKPKSAGRLLL 498
++YN + GL V KF EMN N Y + ++L K K+ RL L
Sbjct: 440 TNYNSMTGKIPEGLGNLVSLKFIEMNNNFYEGTIPDSLGKLKNLNRLYL 488
>07_03_0554 - 19401092-19402540
Length = 482
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 334 YLIFPPSSYNLLDMFRKHGLSEEVHDKFREMN 429
Y+ FP S+ L + R GL EEV +F EM+
Sbjct: 135 YVYFPCSASMLALLLRSPGLDEEVAVEFEEMD 166
>07_01_0544 + 4012457-4012796,4012897-4013069
Length = 170
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 99 QCLGLPSACEVQFPE-SNNSCGELIAPAETT 10
+ LGLP AC+VQ P SN G PA T
Sbjct: 94 RALGLPDACKVQTPPVSNCKSGAAAPPAGQT 124
>02_02_0138 +
7114949-7115656,7116388-7116435,7116830-7117988,
7118336-7118424,7118697-7118732
Length = 679
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 355 SYN-LLDMFRKHGLSEEVHDKFREMNENKY--TMLVYNTLLK 471
+YN L++ KHG +E H F+EM E Y + Y+ L++
Sbjct: 516 TYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIE 557
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 334 YLIFPPSSYNLLDMFRKHGLSEEVHDKFREMNENKYTMLVYNTL 465
Y++ + YN+ H S+++++K+RE E T +V +L
Sbjct: 42 YMMLYTTIYNMCTQKPPHDYSQQLYEKYRESFEEYITSMVLPSL 85
>02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225
Length = 489
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 403 LLRLNRAYGTCPISCRSLEGILS 335
L+RLN GT P+SC +G++S
Sbjct: 106 LVRLNSTPGTPPVSCVIADGVMS 128
>04_03_1015 - 21734381-21736534
Length = 717
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 270 VWAGVD*VASIVQEVFNESRDNIRQGSSFLVSRFGIEDGYEQMV 139
VWAGV + V + RDN + F + GYEQ V
Sbjct: 246 VWAGVSPLVYTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHV 289
>04_03_0515 + 16698589-16701066
Length = 825
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 355 SYN-LLDMFRKHGLSEEVHDKFREMNENKY--TMLVYNTLL 468
SYN L+D F K G ++ HD F +M E ++ Y++L+
Sbjct: 226 SYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLI 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,209,727
Number of Sequences: 37544
Number of extensions: 294121
Number of successful extensions: 840
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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