Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32070
         (506 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...    35   0.19 
AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase p...    35   0.19 
BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin superfam...    31   3.1  
AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin superfam...    31   3.1  
AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin superfam...    31   3.1  
AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.     31   3.1  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 2   KXVVVSAGAINSPQLLLLSG 61
           K V++S GAINSPQLL+LSG
Sbjct: 290 KEVILSGGAINSPQLLMLSG 309


>AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase
           protein.
          Length = 482

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 2   KXVVVSAGAINSPQLLLLSG 61
           K V++S GAINSPQLL+LSG
Sbjct: 178 KEVILSGGAINSPQLLMLSG 197


>BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin
           superfamily, member 9 protein.
          Length = 1163

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
 Frame = -2

Query: 163 RRRVRTNGPASFTPTGKSALTSMFRSS--------KCLRGPIPG-EQQQLWG 35
           R+R+R + P  F+PTGKSA  S   S         K    P+P   Q  LWG
Sbjct: 754 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWG 805


>AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin
           superfamily, member 9 protein.
          Length = 1163

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
 Frame = -2

Query: 163 RRRVRTNGPASFTPTGKSALTSMFRSS--------KCLRGPIPG-EQQQLWG 35
           R+R+R + P  F+PTGKSA  S   S         K    P+P   Q  LWG
Sbjct: 754 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWG 805


>AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin
           superfamily, member 9 protein.
          Length = 1179

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
 Frame = -2

Query: 163 RRRVRTNGPASFTPTGKSALTSMFRSS--------KCLRGPIPG-EQQQLWG 35
           R+R+R + P  F+PTGKSA  S   S         K    P+P   Q  LWG
Sbjct: 770 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWG 821


>AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.
          Length = 1189

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
 Frame = -2

Query: 163 RRRVRTNGPASFTPTGKSALTSMFRSS--------KCLRGPIPG-EQQQLWG 35
           R+R+R + P  F+PTGKSA  S   S         K    P+P   Q  LWG
Sbjct: 780 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWG 831


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,411,932
Number of Sequences: 237096
Number of extensions: 1655049
Number of successful extensions: 3279
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3279
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)