Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32069
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 326 5e-90
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 322 1e-88
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 319 7e-88
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 319 7e-88
SB_56| Best HMM Match : Actin (HMM E-Value=0) 318 2e-87
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 6e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 103 7e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 89 2e-18
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 7e-15
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 62 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.2
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 9.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 326 bits (802), Expect = 5e-90
Identities = 151/157 (96%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 322 bits (791), Expect = 1e-88
Identities = 148/157 (94%), Positives = 152/157 (96%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 319 bits (784), Expect = 7e-88
Identities = 148/157 (94%), Positives = 152/157 (96%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 319 bits (784), Expect = 7e-88
Identities = 148/155 (95%), Positives = 151/155 (97%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQ 410
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
IMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 318 bits (780), Expect = 2e-87
Identities = 147/155 (94%), Positives = 151/155 (97%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQ 410
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
IMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 1e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTF 317
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +3
Query: 390 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTG V+ SG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 119
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 153 bits (372), Expect = 6e-38
Identities = 73/154 (47%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Frame = +3
Query: 63 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 236
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 237 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFE + +Y+AIQAVL+LYA G TG V+ SG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSG 160
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 103 bits (248), Expect = 7e-23
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +3
Query: 297 KIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLY 476
K+W H F ++LRV E+ PVLLTEAPLNP NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 477 ASGRTTGXVLYSG 515
ASGRTTG V G
Sbjct: 2189 ASGRTTGTVFDCG 2201
Score = 60.5 bits (140), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 12 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = +3
Query: 345 EHPVLLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+HPVLLTEAPLNP NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VL +G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAG 182
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/87 (39%), Positives = 56/87 (64%)
Frame = +3
Query: 255 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETFNS 434
PI+ G+I +WD EKI + + ++ HP+L++EA N REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 435 PAMYVAIQAVLSLYASGRTTGXVLYSG 515
PA ++ +VL+ +A+GR+ G V+ SG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = +3
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
IMFE FNSPA+YVAIQAVLSLYASGRTTG V SG
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSG 35
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 185
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 186 --MGQKD-SYVGDEAQSKRGILTL 248
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 183 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 60 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 239
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 240 LTLKY--PIEHGIITNWDDMEKIWHHTFYNE 326
L Y P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPXXNRE 398
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 167 VARATHDXXXXXXXXXXXXETGLAHAGAIVDYKRSNIVV 51
+AR+ D ETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 172 PWWRGRPTMDGXTARGASSPAKPALHMPEP 83
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 42 KMCDDDVAALVVDNG-SGMCKAGFAGD 119
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 63 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 167
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 166 WRGRPTMDGXTARGASSPAKPALHMPEP 83
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,768
Number of Sequences: 59808
Number of extensions: 293009
Number of successful extensions: 808
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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