Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32069
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 326 6e-90
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 324 2e-89
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 324 2e-89
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 324 2e-89
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 324 2e-89
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 324 2e-89
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 324 2e-89
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 324 2e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 311 2e-85
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 285 1e-77
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 231 2e-61
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 197 4e-51
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 2e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 1e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 154 4e-38
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 126 1e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 1e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 5e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 34 0.069
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 6.0
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 6.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 6.0
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 6.0
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 6.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 326 bits (801), Expect = 6e-90
Identities = 151/157 (96%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 149/157 (94%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 324 bits (797), Expect = 2e-89
Identities = 150/157 (95%), Positives = 153/157 (97%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 311 bits (764), Expect = 2e-85
Identities = 142/155 (91%), Positives = 150/155 (96%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQ 410
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
IMFETFN+PAMYV IQAVLSLYASGRTTG VL +G
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTG 156
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 285 bits (700), Expect = 1e-77
Identities = 132/139 (94%), Positives = 135/139 (97%)
Frame = +3
Query: 99 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 278
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 279 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQ 458
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 459 AVLSLYASGRTTGXVLYSG 515
AVLSLYASGRTTG VL SG
Sbjct: 125 AVLSLYASGRTTGVVLDSG 143
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 231 bits (565), Expect = 2e-61
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +3
Query: 177 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 356
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 357 LLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
LLTEAPLNP NREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 197 bits (480), Expect = 4e-51
Identities = 90/159 (56%), Positives = 120/159 (75%), Gaps = 4/159 (2%)
Frame = +3
Query: 51 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 221
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 222 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPXXNRE 398
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 399 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG VL SG
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 2e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKI 302
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKI 302
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKI 302
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 1e-46
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDM 293
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 154 bits (373), Expect = 4e-38
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 3/152 (1%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 242
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 243 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPXXNREKMTQIMF 419
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 420 ETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
E + ++YVA+QAVL+LYA G TG V+ SG
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSG 160
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 126 bits (303), Expect = 1e-29
Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 13/159 (8%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 188
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 189 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 365
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 366 EAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYAS 482
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 93.1 bits (221), Expect = 1e-19
Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 227
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 228 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 363 TEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+E+ N REK+T+IMFE F PA Y++ VLS +A GRT G ++ SG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/123 (26%), Positives = 57/123 (46%)
Frame = +3
Query: 60 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 239
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 240 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMF 419
++ PIE G + NWD ++IW TF + V + LT+ + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 420 ETF 428
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/123 (26%), Positives = 57/123 (46%)
Frame = +3
Query: 60 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 239
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 240 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMF 419
++ PIE G + NWD ++IW TF + V + LT+ + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 420 ETF 428
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 33.9 bits (74), Expect = 0.069
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 2/151 (1%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 242
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 243 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFE 422
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 423 TFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+ + Q L LYA TTG V+ G
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIG 329
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 190 PIPTITPWWRGRPTMDGXTARGASSPAKPALHMPEPL 80
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 99 KAGFAGDDAPRAVFPSIVGRPRHQG 173
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 240 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 157
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 240 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 157
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 240 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 157
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 240 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 157
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 240 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 157
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,253,320
Number of Sequences: 27780
Number of extensions: 206463
Number of successful extensions: 895
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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