Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32069
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 299 5e-82
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 299 7e-82
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 299 7e-82
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 299 9e-82
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 299 9e-82
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 298 1e-81
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 298 1e-81
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 298 1e-81
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 298 1e-81
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 275 1e-74
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 218 2e-57
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 190 6e-49
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 163 5e-41
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 126 9e-30
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 117 5e-27
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 103 7e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 81 6e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 9e-15
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 77 9e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 32 0.20
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 32 0.20
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.1
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 4.3
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 5.7
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 5.7
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 7.5
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 9.9
At3g32904.1 68416.m04164 hypothetical protein 27 9.9
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 299 bits (735), Expect = 5e-82
Identities = 138/154 (89%), Positives = 145/154 (94%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 299 bits (734), Expect = 7e-82
Identities = 138/154 (89%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 299 bits (734), Expect = 7e-82
Identities = 138/154 (89%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 299 bits (733), Expect = 9e-82
Identities = 137/154 (88%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 299 bits (733), Expect = 9e-82
Identities = 137/154 (88%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN+PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 298 bits (732), Expect = 1e-81
Identities = 138/154 (89%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFN PAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 298 bits (732), Expect = 1e-81
Identities = 135/154 (87%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFNSPAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 298 bits (732), Expect = 1e-81
Identities = 135/154 (87%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFNSPAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 298 bits (732), Expect = 1e-81
Identities = 135/154 (87%), Positives = 144/154 (93%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP NREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFETFNSPAMYVAIQAVLSLYASGRTTG VL SG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 275 bits (675), Expect = 1e-74
Identities = 121/154 (78%), Positives = 141/154 (91%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 233
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 234 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 413
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNP NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
MFE+F P+MY+ IQAVLSLY+SGRTTG VL SG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSG 159
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 218 bits (533), Expect = 2e-57
Identities = 101/149 (67%), Positives = 119/149 (79%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 249 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETF 428
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NP NREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 429 NSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+ PAMYV++Q+VL LY+SGRTTG VL G
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLG 147
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 190 bits (462), Expect = 6e-49
Identities = 83/113 (73%), Positives = 100/113 (88%)
Frame = +3
Query: 177 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 356
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 357 LLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
LLTEAPLNP +REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VL SG
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSG 113
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 163 bits (397), Expect = 5e-41
Identities = 74/156 (47%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 227
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 228 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMT 407
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 408 QIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
+ MFE +N +++ IQAVL+LYA G TG V+ SG
Sbjct: 122 ETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 126 bits (304), Expect = 9e-30
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 22/176 (12%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 203
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 204 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 347
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 348 HPVLLTEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
HP+LL E PLN REK ++MFE + PA+++A VL+ +A+GR T V+ G
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCG 180
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 117 bits (281), Expect = 5e-27
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 21/171 (12%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 191
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 192 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 363 TEAPLNPXXNREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A+G TT +G
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKCEMTG 174
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 103 bits (247), Expect = 7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 188
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 189 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 365
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 366 EAPLNPXXNREK 401
E PLN REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 80.6 bits (190), Expect = 6e-16
Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +3
Query: 66 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 242
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 243 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPXXNREKMTQIMF 419
TL PIE G+I +WD ME + + Y L E +L T+ P RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 420 ETFNSPAMYVAIQAVLSLYASGRTTGXVLYSG 515
ETFN Y + QAVLSLYA GR +G + G
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIG 144
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 76.6 bits (180), Expect = 9e-15
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 249 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETF 428
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 429 NSPAMYVA-IQAVLSLYASGRTTGXVL 506
++Y+A Q+++ LY + R +L
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSIL 148
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 76.6 bits (180), Expect = 9e-15
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 248
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 249 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPXXNREKMTQ 410
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 411 IMFETFNSPAMYVAIQAVLS 470
++FET+ PA+ + A S
Sbjct: 138 LLFETYGVPAVAFGVDAAFS 157
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Frame = +3
Query: 312 TFYNELRVAPEEHPVLLTEAPL-------NPXXNREKMTQIMFETF---NSPAMYVAIQA 461
T + ++V P P++++ PL + +R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 462 VLSLYASGRTTGXVLYSG 515
VL+LYA+ RT+G V+ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Frame = +3
Query: 312 TFYNELRVAPEEHPVLLTEAPL-------NPXXNREKMTQIMFETF---NSPAMYVAIQA 461
T + ++V P P++++ PL + +R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 462 VLSLYASGRTTGXVLYSG 515
VL+LYA+ RT+G V+ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 213 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXN 392
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 393 REK 401
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 213 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXN 392
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 393 REK 401
REK
Sbjct: 225 REK 227
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 172 PWWRGRPTMDG--XTARGASSPAKPALHM 92
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 2 VNTSVPNTNTHKVQDVRRRCCCA 70
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 2 VNTSVPNTNTHKVQDVRRRCCCA 70
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.1 bits (57), Expect = 7.5
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 231 RGILTL 248
+ L
Sbjct: 89 KTFAVL 94
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 176 DGRYGPERLLRG*RGPEQERYPHSEVPHRARXHHQ 280
D RYGP++ R PE + S + HR HQ
Sbjct: 820 DYRYGPDQAPVWARKPEGSKKDDSAITHRRARKHQ 854
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 217 SSPT*ESFWPIPTITPWWRGRPTMDGXTARGASSPAKPALHMP 89
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 54 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 179
+D+ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,949,966
Number of Sequences: 28952
Number of extensions: 198345
Number of successful extensions: 569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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