Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32068
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.0  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    23   8.1  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 16/59 (27%), Positives = 22/59 (37%)
 Frame = +1

Query: 16   HHSQHFGKKHSHNSHNMFSGNVKFALRSLPSATLEKGGREAPXVGLEGVPRELNSPLVE 192
            HH  H G  H H    +  G    A  S P+  L     + P V +E +      P V+
Sbjct: 1315 HHHLHHGHHHHHGGEGVPMGPAN-AAPSSPAGVLV---AKVPPVAVEDIENSKQQPPVQ 1369


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   GTXAAHHSQHFGKKHSHNSHNMFS 72
           GT   HH+ H+   H  + HNMF+
Sbjct: 496 GTDLPHHT-HYQLHHQMSYHNMFT 518


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   GTXAAHHSQHFGKKHSHNSHNMFS 72
           GT   HH+ H+   H  + HNMF+
Sbjct: 472 GTDLPHHT-HYQLHHQMSYHNMFT 494


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 277 VDLGDRARXQLVDELAKNSAVP*GHPQIVPPGGNL 173
           + +G RA+     + A  S    GHP ++PP   L
Sbjct: 67  MSVGQRAKLVCSPDYAYGSR---GHPGVIPPNARL 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,821
Number of Sequences: 2352
Number of extensions: 10621
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)