Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32067
         (492 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo...    36   0.49 
UniRef50_A0DBN2 Cluster: Chromosome undetermined scaffold_44, wh...    34   1.5  
UniRef50_A4VEY6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.5  
UniRef50_A5DX55 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_Q8IJF6 Cluster: Putative uncharacterized protein; n=4; ...    32   6.0  
UniRef50_A6RZZ8 Cluster: Putative uncharacterized protein; n=2; ...    32   6.0  
UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -...    32   8.0  

>UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo
           saltans|Rep: NADH dehydrogenase subunit 5 - Bodo saltans
          Length = 212

 Score = 35.9 bits (79), Expect = 0.49
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +1

Query: 94  REVIGAFL-MCNACLILDFCNDKLLMHF*LNKFVFIYYTVIIVCIFFCSRVLLIRLFLL* 270
           ++++  FL +C    +L+F     L  F    F + Y+ +  +C  F   VLL  LFLL 
Sbjct: 16  KDLVLIFLALCVFLFVLEFFFVVFLFVF--ITFWYNYFLLFFLCFLFKCFVLLDLLFLLF 73

Query: 271 NF---M*YY*SLKMICFLLLMCC 330
           +F   + Y   L  +CF LL CC
Sbjct: 74  DFELCLLYCLFLMFMCFFLLFCC 96


>UniRef50_A0DBN2 Cluster: Chromosome undetermined scaffold_44, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_44, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2774

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +3

Query: 195  YLLYSHYSVYFFLFTSFAYSFIFTLKFHVILLIS*DDLFLTFNVLS 332
            Y+ + +  +YF +FTS A S +FT     +LL+   D+F  F VL+
Sbjct: 2482 YIFFDYEMIYFLIFTSIAISGLFTKTLLALLLL---DVFWRFPVLT 2524


>UniRef50_A4VEY6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 351

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 17/65 (26%), Positives = 37/65 (56%)
 Frame = +1

Query: 73  LFRKSRLREVIGAFLMCNACLILDFCNDKLLMHF*LNKFVFIYYTVIIVCIFFCSRVLLI 252
           LF+ + ++++   FL+ N C ++   N +  ++F    F+FIY+ +I++ + +     L+
Sbjct: 154 LFQFTVMKQLYYHFLLPNQCYLIYEQNFRHSLNFYYCIFLFIYFPIILLKVKYSHNCYLL 213

Query: 253 RLFLL 267
           R  LL
Sbjct: 214 RTLLL 218


>UniRef50_A5DX55 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 222

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 195 YLLYSHYSVYFFLFTSFAYSFIFTLKFHVILLI 293
           YLL+SH    F    SF+ SF F+L F +I L+
Sbjct: 24  YLLFSHSDFSFSFSFSFSLSFSFSLSFSLIFLV 56


>UniRef50_Q8IJF6 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1541

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 174 LVKQIRFYLLYSHYSVYFFLFTSFAYSFIFTLKFHVILL 290
           L+  I  +L+ SHY +++F+  +  YSF F   F  I +
Sbjct: 15  LIFSIASWLILSHYIIFYFILFNLIYSFFFFFIFIFIFI 53


>UniRef50_A6RZZ8 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 695

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 192 FYLLYSHYSVYFFLFTSFAYSFIFTLKFHVILLIS*DDLFLTFNVL 329
           +Y  Y +Y  Y++ +  + Y + +T  FH++  +S + L  T  +L
Sbjct: 649 YYYYYYYYYYYYYYYYYYYYYYYYTFDFHLLTKVSQEILRFTIMLL 694


>UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -
           Human herpesvirus 6B
          Length = 193

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 187 FVFIYYTV-IIVCIFFCSRVLLIRLFLL*NFM*YY*SLKMICFLLLMCCHSNSTVAEAGL 363
           F+ +Y+ V I +C+FFC  + L   F +  F+  +  +     +  +C ++ + VA   +
Sbjct: 10  FLCVYFFVCIFLCVFFCVCIFLCVFFCVYFFVCVFFCVCFFVCVFFVCVYAFAHVAVCSV 69

Query: 364 SLNRNIC 384
              R++C
Sbjct: 70  RPRRHVC 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,359,374
Number of Sequences: 1657284
Number of extensions: 6037262
Number of successful extensions: 14990
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14824
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)