Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32064
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   9.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   9.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 313 PTWFWRWPDARR 348
           PTWF RW ++++
Sbjct: 18  PTWFVRWLNSQQ 29


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 161 PSLAGSWKQEQVKIIYYD 108
           P+L   WK E+++ IY +
Sbjct: 469 PALIEGWKVEKIQEIYLE 486


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 242 VHRNHLFPSFLVVHRVLHHGNHDLVD 165
           +H  HL    +  H+ LH+   +L+D
Sbjct: 199 IHSTHLNGDIVKEHQNLHNKICNLID 224


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   RFTTSPY*K*DYRFCDCLSLSLYSFYAIL 87
           +FT   +   D+ FC  +  +L ++  IL
Sbjct: 341 QFTAKDFFNLDWTFCHMMIAALTTYLVIL 369


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 367 SSPSITASAH 338
           SSPS+TA+ H
Sbjct: 172 SSPSVTAAPH 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,025
Number of Sequences: 336
Number of extensions: 1492
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)