Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32064
         (370 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058...    28   2.0  
08_01_0386 + 3424561-3425346                                           27   3.5  
04_03_0755 + 19310648-19311603,19312420-19312633                       27   4.6  
12_01_1113 - 11888691-11888900,11891794-11892243,11892274-118929...    27   6.1  
08_01_0514 + 4481383-4481903,4482532-4484590,4485038-4485107,448...    27   6.1  
05_02_0049 - 6083364-6084111,6084140-6084246                           27   6.1  
03_01_0534 + 3996479-3997458,3997938-3998265                           27   6.1  

>10_07_0172 +
           13804803-13805293,13805423-13805537,13805766-13805831,
           13805921-13806009,13806103-13806193,13806312-13806458,
           13806575-13806667,13806745-13806846,13806957-13807541,
           13808523-13808813,13808866-13808937
          Length = 713

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -3

Query: 284 VVHRDLSCQIHPVHVHRNHLFPSFLVVHRVLHHGNHDLVDLPSLAGSWKQEQVKIIYY 111
           V H +    +  +H    HL P     H + H G  DL    + AGS    Q K+++Y
Sbjct: 629 VPHDETVLVVEELHSDLGHLTPGAGAAHHLHHDGKFDLGIHAAQAGS-IYSQAKLMFY 685


>08_01_0386 + 3424561-3425346
          Length = 261

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 367 SSPSITASAHRATSKTTWASTH 302
           SSP+  ASA  A S   WAS H
Sbjct: 23  SSPAAAASASPAASAVVWASNH 44


>04_03_0755 + 19310648-19311603,19312420-19312633
          Length = 389

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +3

Query: 189 VEDAVDHQE*GEEVVSMYVDGVDLA*EVAVDHLGAGRLCVEAHVVLE 329
           VEDA+      EE V +YV+ + LA  VAV   GAG    E  +++E
Sbjct: 313 VEDAISRLLRNEEDV-VYVEKLVLAFNVAVRKSGAGAARAEERLMVE 358


>12_01_1113 -
           11888691-11888900,11891794-11892243,11892274-11892950,
           11893396-11893957,11894121-11894207
          Length = 661

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 214 NEGKRWFRCTWTGWIWHERSRWTT*GR 294
           N G  W+R  +T W+  E + WT  GR
Sbjct: 61  NGGPDWYR-EYTLWVLEEENSWTKVGR 86


>08_01_0514 +
           4481383-4481903,4482532-4484590,4485038-4485107,
           4485434-4485660,4486238-4486324,4486408-4487114,
           4487206-4487270,4487323-4487837,4487898-4487991,
           4488116-4488398,4488494-4488689,4488913-4489254
          Length = 1721

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 54  FFVVVLILRDIRSWYAIDIVIYN 122
           +F+V+  +RD  +W AI++ ++N
Sbjct: 175 YFIVIDDVRDAEAWKAIELALFN 197


>05_02_0049 - 6083364-6084111,6084140-6084246
          Length = 284

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 358 SITASAHRATSKTTWASTHRRPAPRWSTATSH-AKSTPS 245
           S  ASA R  S ++W S+   PA R + +T+  A ++PS
Sbjct: 52  SAAASAGRCWSSSSWRSSPPSPAARSTCSTARTAPASPS 90


>03_01_0534 + 3996479-3997458,3997938-3998265
          Length = 435

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -1

Query: 361 PSITASAHRATSKTTWASTHRRPAPRWSTATSHAKSTPSTY 239
           P++ ++      +  WA+ +R   PRW + +  A +  +TY
Sbjct: 276 PTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTY 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,408,843
Number of Sequences: 37544
Number of extensions: 166989
Number of successful extensions: 568
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)