Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32064
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical pr... 31 0.34
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 1.8
AC006832-2|AAO38580.1| 366|Caenorhabditis elegans Hypothetical ... 27 3.2
AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical ... 27 3.2
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 26 9.7
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 26 9.7
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 26 9.7
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 26 9.7
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 26 9.7
>Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical
protein ZK617.4 protein.
Length = 178
Score = 30.7 bits (66), Expect = 0.34
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 370 KSSPSITASAHRATSKTTWASTHRRPAPRWSTATSHAKSTPST 242
K S S S H A+ ++ +S+ RR PR +SH+ S+PS+
Sbjct: 14 KKSASNDGSDHGASPSSSTSSSSRRLPPRPPLESSHSASSPSS 56
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -1
Query: 358 SITASAHRATSKTTWASTHRRPAPRWSTATSHAKSTPST 242
SIT S +ATS ++ +T AP+ STA S ++PST
Sbjct: 810 SIT-STQQATSTSSVITTGSTSAPQSSTAVSSTTTSPST 847
>AC006832-2|AAO38580.1| 366|Caenorhabditis elegans Hypothetical
protein ZK355.2a protein.
Length = 366
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = -1
Query: 364 SPSITASAHRATSKTTWASTHRRPAPR---------WSTATSHAKSTP 248
S S SA +T+ +TW+S H R R W AT+H+ S P
Sbjct: 303 SDSDEDSAESSTASSTWSSNHSRNNVRIADVITVRNWRRATAHSPSLP 350
>AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical
protein ZK355.2b protein.
Length = 376
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = -1
Query: 364 SPSITASAHRATSKTTWASTHRRPAPR---------WSTATSHAKSTP 248
S S SA +T+ +TW+S H R R W AT+H+ S P
Sbjct: 313 SDSDEDSAESSTASSTWSSNHSRNNVRIADVITVRNWRRATAHSPSLP 360
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 337 RATSKTTWASTHRRPAPRWS 278
R++S W+ST R+ PRWS
Sbjct: 542 RSSSNLGWSSTTRKVYPRWS 561
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 370 KSSPSITASAHRATSKTTWASTHRRPAPRWSTATSHAK 257
+S S + HR A TH RP P ST+TS K
Sbjct: 13 QSETSHVTTPHRQNDLLRQAVTHGRPPPVPSTSTSGKK 50
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 298 AYAWRPTWFWRWPDA 342
AY W P W WRW A
Sbjct: 483 AYTW-PIWKWRWTTA 496
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical protein
F41H10.3a protein.
Length = 1140
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 352 TASAHRATSKTTWASTHRRPAPRWSTATSHAKSTPST 242
T SA T++TT +++ P T TSH + TP T
Sbjct: 1068 TISAGSTTTETTTGDSNQSNPPL-RTYTSHIRKTPGT 1103
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 272 DLSCQIHPVHVHRNHLFPSFLVVHRVLHHGNH 177
DLSC + H F L+++ + HG+H
Sbjct: 352 DLSCAAQNILTRERHNFTGALLLYCLSRHGSH 383
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 346 SAHRATSKTTWASTHRRPAPRWSTATSHAKSTPST 242
S H + T+ S+ R ST TS++KSTP T
Sbjct: 81 SGHGRSFSTSSGSSGYRGLSSGSTNTSYSKSTPRT 115
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 270 VAVDHLGAGRLCVEAHVVLEVARCAEA 350
+ D++ GRL VEAHV + C +A
Sbjct: 511 IVYDYMVDGRLTVEAHVNITRVTCLDA 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,012,230
Number of Sequences: 27780
Number of extensions: 134706
Number of successful extensions: 451
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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