Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32062
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    30   0.008
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   8.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 30.3 bits (65), Expect = 0.008
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 23  DGKPETITYFADETGYHAXGESIP 94
           DG+  +ITY ADE G+   G  IP
Sbjct: 81  DGQQVSITYVADENGFQVQGSHIP 104


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 51  KYVMVSGLPSSVR 13
           KY+ VSGLP   R
Sbjct: 468 KYMAVSGLPEPCR 480


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 51  KYVMVSGLPSSVR 13
           KY+ VSGLP   R
Sbjct: 468 KYMAVSGLPEPCR 480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,186
Number of Sequences: 438
Number of extensions: 1082
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)