Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32060
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.22 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.22 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.22 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.22 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 305  SYFLFPVLYSKSDR*LPSWQSNRXVQKKTKKRID 406
            S +L  +LYS  +  + SW +     KKTKK ++
Sbjct: 1041 SMYLLLILYSIINLNVVSWGTREVAVKKTKKELE 1074


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 305  SYFLFPVLYSKSDR*LPSWQSNRXVQKKTKKRID 406
            S +L  +LYS  +  + SW +     KKTKK ++
Sbjct: 1041 SMYLLLILYSIINLNVVSWGTREVAVKKTKKELE 1074


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 305  SYFLFPVLYSKSDR*LPSWQSNRXVQKKTKKRID 406
            S +L  +LYS  +  + SW +     KKTKK ++
Sbjct: 1041 SMYLLLILYSIINLNVVSWGTREVAVKKTKKELE 1074


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 305  SYFLFPVLYSKSDR*LPSWQSNRXVQKKTKKRID 406
            S +L  +LYS  +  + SW +     KKTKK ++
Sbjct: 1041 SMYLLLILYSIINLNVVSWGTREVAVKKTKKELE 1074


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 319 SCSLFEKRPLVAVMAIESQ 375
           +C + EKRP+V++  I++Q
Sbjct: 166 ACLMEEKRPMVSLQVIKAQ 184


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 319 SCSLFEKRPLVAVMAIESQ 375
           +C + EKRP+V++  I++Q
Sbjct: 166 ACLMEEKRPMVSLQVIKAQ 184


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 319 SCSLFEKRPLVAVMAIESQ 375
           +C + EKRP+V++  I++Q
Sbjct: 486 ACLMEEKRPMVSLQVIKAQ 504


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 234 QIRKSIDFKKKLFYNHRSQWPGPKAISCFLFFIRKAT 344
           +I K +DF   + Y+   QW      +  LF +  AT
Sbjct: 695 EISKYLDFINVMTYDFHGQWERTVGHNSPLFPLESAT 731


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,148
Number of Sequences: 336
Number of extensions: 2129
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)