Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32059
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g09930.1 68416.m01188 GDSL-motif lipase/hydrolase family prot...    32   0.26 
At4g02640.2 68417.m00359 bZIP transcription factor family protei...    27   5.7  
At4g02640.1 68417.m00358 bZIP transcription factor family protei...    27   5.7  
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038...    27   5.7  
At1g55130.1 68414.m06296 endomembrane protein 70, putative simil...    27   7.5  
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI...    27   9.9  
At3g03110.1 68416.m00307 exportin 1, putative strong similarity ...    27   9.9  

>At3g09930.1 68416.m01188 GDSL-motif lipase/hydrolase family protein
           similar to SP|P40602 Anther-specific proline-rich
           protein APG precursor {Arabidopsis thaliana}; contains
           Pfam profile: PF00657 lipase acylhydrolase with
           GDSL-like motif
          Length = 354

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 412 VNRYGNHLSPCGLWVMSSYSCM-CDEKFYQK 323
           V+R+GN L PC + V SSY C   DEK  +K
Sbjct: 285 VSRFGNPLKPCCVGVNSSYDCSNVDEKGEKK 315


>At4g02640.2 68417.m00359 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription
           factor; identical to cDNA bZIP protein BZO2H1,
           alternatively spliced GI:10954094
          Length = 417

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 385 VISGYRSDSHYNLSTDTHLGIPNLMPVSLDVS*NSPPLLT 504
           +I  Y+  S+ N  ++ ++GIP ++P  L  +  +PP  T
Sbjct: 338 IIPAYQPHSNLNHMSNQNIGIPTILPPRLGNNFAAPPSQT 377


>At4g02640.1 68417.m00358 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription
           factor; identical to cDNA bZIP protein BZO2H1,
           alternatively spliced GI:10954094
          Length = 411

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 385 VISGYRSDSHYNLSTDTHLGIPNLMPVSLDVS*NSPPLLT 504
           +I  Y+  S+ N  ++ ++GIP ++P  L  +  +PP  T
Sbjct: 332 IIPAYQPHSNLNHMSNQNIGIPTILPPRLGNNFAAPPSQT 371


>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
           Nuf2 family domain; similar to Myosin-like protein NUF2
           (Nuclear filament-containing protein 2) (Nuclear
           division protein nuf2) (Swiss-Prot:Q10173)
           [Schizosaccharomyces pombe]
          Length = 974

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 259 SRKFTNKFFVFYFLVFPQTVYFILY 185
           S KF  +FF+ YFLVF   +YF  Y
Sbjct: 768 SMKFFPRFFLLYFLVF--HIYFFSY 790


>At1g55130.1 68414.m06296 endomembrane protein 70, putative similar
           to multispanning membrane protein GI:2276460 from [Homo
           sapiens]
          Length = 637

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 282 WVLYLKPEAGNLRINFLYSIFWFFPK 205
           W  YL   + +L + FLYS+F+FF K
Sbjct: 564 WRAYLTSGSSSLYL-FLYSVFYFFTK 588


>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
           GI:5566292 from [Drosophila melanogaster]; contains
           prosite evidence: PS00383: Tyrosine specific protein
           phosphatases active site
          Length = 632

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 370 PTAHRVISGYRSDSHYNLSTDTHLGIPNLMPVSLDVS 480
           P+A+R ++   S  HYN   +  L + ++  ++ D S
Sbjct: 582 PSANRSVTSSSSSGHYNPIPNNSLAVSDIKAIAADAS 618


>At3g03110.1 68416.m00307 exportin 1, putative strong similarity to
            Exportin1 (XPO1) protein [Arabidopsis thaliana]
            GI:7671510; contains Pfam profile PF03810: Importin-beta
            N-terminal domain
          Length = 1076

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 250  FTNKFFVFYFLVFPQTVYFILYNK-HECGF 164
            F NKF+  YFL   Q V+ +L +  H+ GF
Sbjct: 913  FCNKFYQTYFLQIEQEVFAVLTDTFHKPGF 942


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,082
Number of Sequences: 28952
Number of extensions: 223658
Number of successful extensions: 446
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)