Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32055
         (314 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.33 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.33 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   1.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   1.8  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   1.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 203  KIQTIENE-LDQTQESLMQVNGKLEEKEK 286
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 203  KIQTIENE-LDQTQESLMQVNGKLEEKEK 286
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  HLRAAEKTKPPKW 61
           HLR    T PP+W
Sbjct: 214 HLRLRRDTAPPQW 226


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 151 VFGLLLTHGSAVERIV 104
           VFG LLT+ S+VE ++
Sbjct: 9   VFGALLTYVSSVEYLI 24


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +2

Query: 80  MQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQV 259
           M   K +KD   D+ A+ + + +      EKA+ +   + K   TIEN L     S    
Sbjct: 71  MVKQKHKKDIRADKKALQKLRRE-----VEKAKRDLSSVHKTTLTIENLLADYDFSETLT 125

Query: 260 NGKLEE 277
             K EE
Sbjct: 126 RAKFEE 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,926
Number of Sequences: 336
Number of extensions: 556
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)