Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32055
(314 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 34 0.004
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.22
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 0.29
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 0.51
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 0.67
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 27 0.67
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 26 1.2
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 26 1.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 1.5
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 1.5
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 26 1.5
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 2.0
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 25 2.0
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 2.7
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 3.6
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 25 3.6
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 25 3.6
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 3.6
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 24 6.3
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 24 6.3
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 24 6.3
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 24 6.3
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 8.3
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 23 8.3
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 23 8.3
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 23 8.3
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 34.3 bits (75), Expect = 0.004
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 26 LRAAEKTKPPKWTRSXKTMQAMKLEK-DNALDRAAMCEQQAKDANLRAEKAEXEARQLXK 202
L+AAE + + A LE+ D++ + C QAK + +A ++++
Sbjct: 179 LQAAELRSKDEQVKELNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 203 KIQTIENELDQTQESLMQVNGKLEEKEK 286
++QTI E +Q Q ++++ + EK
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEK 266
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.7 bits (61), Expect = 0.22
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +2
Query: 74 KTMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLM 253
K +Q A+D+ E++ K+ NL E + +++T+ QES
Sbjct: 503 KQIQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTE 562
Query: 254 QVNGKLEEKEKALQNAES 307
+ L+EK +L+ +S
Sbjct: 563 RELRLLQEKAASLERNKS 580
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 125 AMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEKALQN 298
A EQQ + E++ Q +++T+ENEL Q +L + + ++ ++L+N
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKN 472
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 0.29
Identities = 12/64 (18%), Positives = 32/64 (50%)
Frame = +2
Query: 116 DRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEKALQ 295
++ ++ + +D + + E E RQL ++ + ELD Q+ L + ++ ++ ++
Sbjct: 264 EKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIE 323
Query: 296 NAES 307
E+
Sbjct: 324 EKEN 327
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 0.51
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +2
Query: 17 YFHLRAAEKTKPPKWTRSXKTMQAMKLEKDNALDRAAMCEQQAK-DANL----RAEKAEX 181
+ HL+ K + T +AM+ E ++ D ++ A DA + E+ +
Sbjct: 1432 FAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKS 1491
Query: 182 EARQLXKKIQTIENELDQTQESLMQVNGKLE 274
E + K++ +NEL+ Q + +GK E
Sbjct: 1492 EKERTEKELADSKNELEHLQSEAVDADGKTE 1522
Score = 26.6 bits (56), Expect = 0.89
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = +2
Query: 38 EKTKPPKWTRSXKTMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTI 217
EK+ S + +++ LEK N L+++ + +++KD + + + L +++ +
Sbjct: 703 EKSNIQLQLTSLTSERSLALEKLNDLEKSLVLSERSKD------ELDESYKSLQEQLASK 756
Query: 218 ENELDQTQESLMQVNGKLEEKEKALQNAES 307
+ E+ L N +LE+ + N +S
Sbjct: 757 KIEVQNVSSQLSICNSQLEQSNHIVDNLKS 786
Score = 25.8 bits (54), Expect = 1.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 95 LEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLE 274
LEKD + + QQ ++NLR + E ++ K+ + + ++ S Q++
Sbjct: 243 LEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWM 302
Query: 275 EK 280
EK
Sbjct: 303 EK 304
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 0.67
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 110 ALDRAAMCEQQAKDANL--RAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKE 283
A R+++ + N+ + + + R+L K + NE+ QESL + N L +
Sbjct: 618 ATSRSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEM 677
Query: 284 KALQ 295
+A++
Sbjct: 678 EAIR 681
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 27.1 bits (57), Expect = 0.67
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 158 LRAEKAEXEARQLXKKIQTIENELDQTQESL 250
L +EK E +QL KIQ + + +DQT + +
Sbjct: 163 LGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 128 MCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEE-KEKALQ 295
M E+ KDA++ + + + + +EN L Q + ++Q G + KE+ LQ
Sbjct: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQ 57
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 1.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 188 RQLXKKIQTIENELDQTQESLMQVNGKLEEKEKAL 292
R KI + D+T E + + G EE EKAL
Sbjct: 348 RTSGSKISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 167 EKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEK 286
EKAE EA++ ++ +E E + +E+ Q + EEK K
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAK 578
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.8 bits (54), Expect = 1.5
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 92 KLEKDNALDRAAMCE----QQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQV 259
K DN + A++ E + K + A K + KKI +NE +ESL
Sbjct: 1088 KPNNDNYIQIASVQELDDSSKGKAGKMPASKKNKRQKGDVKKIDETKNEATDMEESLTTP 1147
Query: 260 NGKLEEK 280
+GK+ ++
Sbjct: 1148 SGKVNKE 1154
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 1.5
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 74 KTMQAMKLEKDNALDRAAMCEQQAKDAN---LRAEKAEXEARQLXKKIQTIENELDQTQE 244
K + +K ++ L+ + EQ+ +AN L+ E+ E + ++I ++ ++L Q Q+
Sbjct: 65 KNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEINSLNSQL-QIQK 123
Query: 245 S 247
S
Sbjct: 124 S 124
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 2.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 200 KKIQTIENELDQTQESLMQVNGKLEE 277
+KIQT+E + +T++ L G+L++
Sbjct: 785 EKIQTLERRISETEKELESYAGQLQD 810
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 2.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 74 KTMQAMKLEKDNALDRAA-MCEQQAKDANLRAEKAEXEA--RQLXKKIQTIENELDQTQE 244
KT++A+K EK + + Q + N A +E + +Q+ +K + IE D+T +
Sbjct: 156 KTLRALKEEKKMYFNYDNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEISDETDK 215
Query: 245 SLMQVNGKLEEKEK 286
+ EEKEK
Sbjct: 216 LQKLLRELDEEKEK 229
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.0 bits (52), Expect = 2.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 167 EKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAE 304
EKAE E Q+ + +T EN DQT ++ + V ++ L N E
Sbjct: 5 EKAELENMQVESEAKTSEN--DQTIDTKVDVADVTTHVDEDLDNKE 48
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 24.6 bits (51), Expect = 3.6
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +2
Query: 104 DNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKE 283
D ++ + +A RAE AE + +++ ++ E E + +LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 284 K 286
+
Sbjct: 62 E 62
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 24.6 bits (51), Expect = 3.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 80 MQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQV 259
+Q + E N ++A A+ NLR + EARQ + E + + +Q
Sbjct: 196 LQGQQFENVNQNNQAQAAAAAAQ--NLREVR---EARQRLAMVMEHLRERQEQRNLELQR 250
Query: 260 NGKLEEKEKALQ 295
NG EE E+A Q
Sbjct: 251 NGSFEEIERARQ 262
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 24.6 bits (51), Expect = 3.6
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 152 ANLRAEKAEXEARQLXKKIQTIENELDQTQ--ESLMQVNGKLEEKEKAL 292
A++ AEK+E + + + EN D+T+ +SL+ GK EE E ++
Sbjct: 407 ASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSV 455
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 3.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 146 KDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEE 277
K A +A +A + + + + T + +DQ QE++ + LEE
Sbjct: 5 KSAAKKAREALVQKKVINSNVPTDKKSIDQLQENVTSKSHLLEE 48
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 23.8 bits (49), Expect = 6.3
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 DNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKI-QTIENELDQTQESLMQVNGKLEEK 280
+NA + AKD + + +KA+ +++ ++ Q EN L++T+ M +G ++++
Sbjct: 65 ENAKQSVKQTAKDAKDTDYQ-QKAKDAGKKIKEEFSQRSENVLEETRREGMNRDGGVKKE 123
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 23.8 bits (49), Expect = 6.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 227 LDQTQESLMQVNGKLEEKEKALQNAES 307
L +QE L+Q+N KLE+ + S
Sbjct: 480 LSDSQEELLQLNAKLEKANIVIDELNS 506
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 23.8 bits (49), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 29 RAAEKTKPPKWTRSXKTMQAMKLEKDNAL 115
R+ ++TK PKW + T A L D +L
Sbjct: 685 RSDKRTKLPKWIQQYITEGATNLSTDMSL 713
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 23.8 bits (49), Expect = 6.3
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 80 MQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKK-----IQTIENELDQTQE 244
+Q ++ + N +++AAM + K+ + + ARQL + I+ IE D+ Q+
Sbjct: 79 LQQLQQQSFN-MEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQD 137
Query: 245 SLMQVNGKLEE 277
M G+L E
Sbjct: 138 -YMDAAGELNE 147
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 23.4 bits (48), Expect = 8.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 170 KAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEKALQN 298
K E + K+ ENE+++ + + L+++EK L+N
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLEN 242
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 23.4 bits (48), Expect = 8.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 98 EKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEE 277
E +N LD E++ A+ EK L ++ ++ DQ+Q L++ +LE
Sbjct: 419 EMNNVLD-----EKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELET 473
Query: 278 KEK 286
KEK
Sbjct: 474 KEK 476
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 23.4 bits (48), Expect = 8.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 137 QQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEEKEKA 289
++A R E+A+ EA++L KK+ E L + +E + K +KE+A
Sbjct: 707 ERAAQERERKEQAK-EAKRL-KKLAKEEKRLKKKEEKARKAEEKRLQKERA 755
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 23.4 bits (48), Expect = 8.3
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 RVDSTYFHLRAAEKTKPPKWTRSXKTMQAMKLEKD-NALDRAAMCEQQAKDANLRAEKAE 178
RVDS+ +L A KTK R + +A L N + ++ E ++ L + E
Sbjct: 449 RVDSSKMNLSAGSKTKSKLQRRRRRRHEARPLHYQLNQMYNSSASEAESDQELLLSSGDE 508
Query: 179 XEARQLXKKIQTIENE 226
R I++++++
Sbjct: 509 RVERGKIGSIKSVKSD 524
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,730
Number of Sequences: 5004
Number of extensions: 10261
Number of successful extensions: 81
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 83936266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -