Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32055
         (314 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.041
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.22 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   2.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   4.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   4.7  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 0.041
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +2

Query: 98  EKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVNGKLEE 277
           EKD    RA +   Q  +  L   + E E  +  +K+Q   NE  +  ++L  V GKL+E
Sbjct: 519 EKDLEEKRARL---QTLEEALPVTRTELETAK--QKLQENANEERELTQTLRAVQGKLQE 573

Query: 278 KEKALQNAES 307
              A+Q+  S
Sbjct: 574 SMAAMQSTRS 583



 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/57 (21%), Positives = 32/57 (56%)
 Frame = +2

Query: 80   MQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESL 250
            ++ MKL  + A + ++  +++      R  + + +  +  + +QTIE +L +T+++L
Sbjct: 972  LEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDTL 1028


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = +2

Query: 83   QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEXEARQLXKKIQTIENELDQTQESLMQVN 262
            +A+     NA D A    Q A+D    AE+A   A  + K+    +N          Q+N
Sbjct: 1424 EALYAASRNAED-ARKNAQTAQDKY--AEEASKLAENIKKRANATKNTARDLHHEADQLN 1480

Query: 263  GKLEEKEKALQNAESXV 313
            G+L + +  L+  E+ +
Sbjct: 1481 GRLAKTDNRLEEREAQI 1497


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 157 VGVFGLLLTHGSAVERI 107
           V +FG+LLTHG  + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 212  TIENELDQTQESLMQVNGKLEEK 280
            T+E ELD+ ++SL +++ K  E+
Sbjct: 1453 TVEKELDREKKSLYKLHIKATEE 1475


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 29  RAAEKTKPPKWTRSXKTMQAMKLEK 103
           R +  T+P  W RS  T +  +L +
Sbjct: 278 RRSRSTRPTSWPRSRPTSKPKRLPR 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,859
Number of Sequences: 2352
Number of extensions: 2502
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)