Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32055
         (314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   6.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   6.2  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 176 EXEARQLXKKIQTIE--NELDQTQESLMQVNGKLEEKEKALQNAE 304
           + + ++   KI  +   N+L   + +L   NG +E  +   QN +
Sbjct: 378 DLDTKKWNNKISALRALNDLYNVKNTLDSYNGSMEINQNIAQNID 422


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 41   KTKPPKWTRSXKTMQAMKLEK 103
            K+KP K+    K   AMKL+K
Sbjct: 1721 KSKPYKFHCMEKNEAAMKLKK 1741


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,945
Number of Sequences: 438
Number of extensions: 634
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)