Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32051
(341 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 118 2e-26
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 107 5e-23
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 100 6e-21
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 95 2e-19
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 94 6e-19
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 90 8e-18
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 87 5e-17
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 86 1e-16
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 84 7e-16
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 79 1e-14
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 70 1e-11
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 69 2e-11
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 68 5e-11
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 67 8e-11
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 65 3e-10
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 60 7e-09
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 60 1e-08
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 59 2e-08
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 59 2e-08
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 54 8e-07
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 53 1e-06
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 52 3e-06
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 50 8e-06
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 47 7e-05
UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3; ... 45 4e-04
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 40 0.014
UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1; ... 38 0.033
UniRef50_P95911 Cluster: Orf c01013 protein; n=1; Sulfolobus sol... 34 0.72
UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3; ... 33 1.2
UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n... 32 2.9
UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3; Caenorhab... 31 3.8
UniRef50_Q3IPC2 Cluster: Predicted helicase; n=2; Halobacteriace... 31 3.8
UniRef50_UPI0000F211F6 Cluster: PREDICTED: hypothetical protein;... 31 6.7
UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145... 31 6.7
UniRef50_Q01NI0 Cluster: Cytochrome C family protein precursor; ... 30 8.8
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 30 8.8
UniRef50_Q20595 Cluster: Putative uncharacterized protein; n=3; ... 30 8.8
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 118 bits (285), Expect = 2e-26
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
MG A +WYSHPR YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 107 bits (257), Expect = 5e-23
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
MGH +++SHPR +GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 100 bits (240), Expect = 6e-21
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
MG N+W+SHPR +G GSRSCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
MGH +++SHP+ +GQGSRSCR SNRHG IRKYGLN CRQCF +YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPQKFGQGSRSCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 93.9 bits (223), Expect = 6e-19
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
MGH+N+W SHP+ YG GSR CR C N HGLIRKYGLN CRQCFR A +IGF K
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 90.2 bits (214), Expect = 8e-18
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 217
M H ++WYS PR +G+GSR CR C++R GLIRKYG++ICRQCFRE A DIGF K+
Sbjct: 1 MTHESVWYSRPRKFGKGSRECRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 87.4 bits (207), Expect = 5e-17
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
M H N+W+SHPR YG+GSR C R GLIRKYGLNI RQ FREYA+DIGF K
Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 86.2 bits (204), Expect = 1e-16
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
M H NIW+SHPR YG+G R CR +N++ +IRKYGLN+CRQ FRE A DIGF K
Sbjct: 23 MAHENIWFSHPRHYGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 83.8 bits (198), Expect = 7e-16
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
M H +++YS PR YG+GSR CR C+++ GLIRKYGL +CRQCFRE + DIGF K
Sbjct: 1 MTHESVFYSRPRNYGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +2
Query: 116 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
R+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 69.7 bits (163), Expect = 1e-11
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +2
Query: 53 MGHANIWYSHPRX-YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 217
MGH + W S + G+G+R C CSN+ LIRKY LN+CRQCFRE A IGF KL
Sbjct: 1 MGHLDQWRSRQKIGMGKGARCCVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +2
Query: 86 RXYGQGSRSCRSCSN-RHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
+ YG G R C+ C + GLIRKYGLN+CRQCFRE AH +GFKKLD
Sbjct: 8 KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 67.7 bits (158), Expect = 5e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 116 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
R CSNRHGLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 85 RVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 66.9 bits (156), Expect = 8e-11
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 68 IWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 217
+W +HPR YG+ S+ CR C R GLI KY + CR+CFRE A IGF K+
Sbjct: 5 LWRTHPRNYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 65.3 bits (152), Expect = 3e-10
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 86 RXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
+ +G+G+ CR C R GLIR YGL +CRQCFRE A ++GFKK
Sbjct: 7 KVFGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 60.5 bits (140), Expect = 7e-09
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 74 YSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
+SH + +G+GSRSC SC G+IRK L +CR+CFREYA DIGF D
Sbjct: 9 HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 107 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
R R C N+ +IRKY LNICRQCFREYA DIGF+K
Sbjct: 120 RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSR 109
MGH+++W SHP YG+GSR
Sbjct: 23 MGHSDVWASHPANYGKGSR 41
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 59.3 bits (137), Expect = 2e-08
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +2
Query: 86 RXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
R +G+G + C+ C +R +I+KYGL +CRQCFRE A+ +GF+K
Sbjct: 10 RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 59.3 bits (137), Expect = 2e-08
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 86 RXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
R +G+G+R C C G+IR+YGL +C+ CF+E AH++GF K
Sbjct: 24 RKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 53.6 bits (123), Expect = 8e-07
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 113 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
C C + G++RKYGL++CRQCFRE A +GF+K
Sbjct: 18 CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 83 PRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 220
PR +G+G+R C C +IR +GL +CR CFRE A +GF+K +
Sbjct: 11 PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 51.6 bits (118), Expect = 3e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2
Query: 107 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 217
R CR C N + + RKYGL ICR+CF+E A IGF KL
Sbjct: 100 RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 50.4 bits (115), Expect = 8e-06
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 104 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
+ CR C GL+ KY + +CRQCFRE A +GFKK
Sbjct: 14 THECRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 47.2 bits (107), Expect = 7e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 110 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
SC+ C GL+ KY + +CRQCFRE + +GF+K
Sbjct: 25 SCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 44.8 bits (101), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRSCSN 130
MGH+N+W SHP+ YG GSR C CS+
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCFVCSS 26
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 39.5 bits (88), Expect = 0.014
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 71 WYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAH 196
W P+ + CR C H +++K+G ICR CFRE A+
Sbjct: 10 WKKEPKYKTRAYTRCRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07181.1 - Gibberella zeae PH-1
Length = 59
Score = 38.3 bits (85), Expect = 0.033
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 53 MGHANIWYSHPRXYGQGSRSCRS 121
M H ++W S PR YG+GSRSC S
Sbjct: 1 MSHESVWNSRPRNYGKGSRSCAS 23
>UniRef50_P95911 Cluster: Orf c01013 protein; n=1; Sulfolobus
solfataricus|Rep: Orf c01013 protein - Sulfolobus
solfataricus
Length = 156
Score = 33.9 bits (74), Expect = 0.72
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 10 LICCSLARNNLIS*NGPRKYLVFSPSQXRTRIPVMPILLQQAWLNPQVRFEHMQTVL 180
L+ C + +N+LIS + P +++ PS+ + P ILL+ ++ P F++ +L
Sbjct: 49 LLICLIGKNSLIS-SDPLAVILYLPSEVFSMTPSSSILLRSGYMEPGEGFQNPHVIL 104
>UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Gloeobacter violaceus
Length = 68
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 113 CRSCSNRHGLIRKYGLNICRQCFREYAH 196
C C G IR +GL CR CFRE AH
Sbjct: 31 CWRCGRPRGYIRDFGL--CRICFREMAH 56
>UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n=1;
Bos taurus|Rep: UPI0000F32986 UniRef100 entry - Bos
Taurus
Length = 54
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 80 HPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 217
H +G +R CR + + L+ + + +CR+C + +I F L
Sbjct: 8 HQALFGSQARGCRKVNTLYLLVPYFSITLCRRCCEQNNKNISFLML 53
>UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3;
Caenorhabditis|Rep: Nuclear receptor NHR-43 -
Caenorhabditis elegans
Length = 459
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 77 SHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 214
S P + CR C R+ + +G++ICR C + + KK
Sbjct: 45 SSPTVADPSNIHCRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90
>UniRef50_Q3IPC2 Cluster: Predicted helicase; n=2;
Halobacteriaceae|Rep: Predicted helicase - Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678)
Length = 1767
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 83 PRXYGQGSRSCRSCSNRHGLIRK-YGLNICRQCFREY 190
P G CR+C+ H R Y L+ CR C +EY
Sbjct: 488 PHLSDAGDIECRTCAQEHDRTRTAYPLSFCRGCGQEY 524
>UniRef50_UPI0000F211F6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 446
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 21 LVSEKQFNFLKWATQIFGIL 80
LV E+ N L WA QIFG+L
Sbjct: 264 LVEERSINILSWALQIFGLL 283
>UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 61
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 113 CRSCSNRHGLIRKYGLNICRQCFREYAH 196
C C H + RK+G +CR CFR+ A+
Sbjct: 24 CVRCGRPHAVNRKFG--VCRLCFRDLAY 49
>UniRef50_Q01NI0 Cluster: Cytochrome C family protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Cytochrome C
family protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 336
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Frame = +2
Query: 59 HANIWYSHPRXYG----QGSRSCRSCSNRHGLI 145
HA+IW S R Y +G+ SC C N HG +
Sbjct: 188 HADIWASFQRPYKHRLPEGAMSCVDCHNPHGSV 220
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 339 DSL*GELGTGPPLE 298
DSL GELGTGPPLE
Sbjct: 279 DSLYGELGTGPPLE 292
>UniRef50_Q20595 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 727
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 100 RIPVMPILLQQAWLNPQVRFEHMQTVLQRVCS*H 201
RIP P++L+Q WL R E R+CS H
Sbjct: 27 RIPKRPLILRQRWLTAIGRTEETVVSQLRICSAH 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,799,668
Number of Sequences: 1657284
Number of extensions: 5164794
Number of successful extensions: 10202
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 9976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10199
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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