Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32050
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    26   0.66 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   1.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.1  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 14/67 (20%), Positives = 32/67 (47%)
 Frame = +3

Query: 99  FRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR*TWTTNNSR 278
           +R+L     TP     Y   + + ++  G++++ +A G + + P   PS+  + T +   
Sbjct: 125 YRKLYRGEKTPERYAPYLAVRPVESLTSGSNVAAAAAGASASTPPTIPSASPSPTRSTDL 184

Query: 279 DQRYSTE 299
            Q Y+ +
Sbjct: 185 SQTYAID 191


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 257  LDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 367
            +D+    G+  Q+    +  +KE+L Y SP+  +L G
Sbjct: 957  VDESDDNGAIKQNEFPSWASNKEYLAYNSPSATFLGG 993


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 264 TNNSRDQRYSTERSNITSPRSS*NISHQPSAI*KADTPQA 383
           T +  D+  S  R+N T    S ++S   S   +A+TP+A
Sbjct: 259 TEDDEDENISVTRTNSTIRSRSSSLSRSRSCSRQAETPRA 298


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 157  GVQYNVGVPGVEETELSLRNGDRFEV 80
            G   N  +PGVEE    L N +  EV
Sbjct: 1296 GFGNNDNLPGVEEVAAELENANESEV 1321


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 259 GRRTIPGISGTAPRGPILRVQGVP 330
           G+  +PG+SG A     + +QG+P
Sbjct: 491 GKVGVPGLSGEAGAKGEMGIQGLP 514


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,851
Number of Sequences: 2352
Number of extensions: 11325
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)