Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32049
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 51 5e-07
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 47 1e-05
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 36 0.026
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 35 0.045
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 35 0.045
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 34 0.059
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 32 0.24
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 31 0.42
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 31 0.55
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 31 0.73
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 31 0.73
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 30 1.3
11_01_0700 + 5764149-5764979 29 1.7
10_08_0526 + 18547154-18547197,18547320-18547467,18547558-185476... 29 1.7
09_02_0374 - 8112021-8112820,8112908-8113152,8113256-8113455,811... 28 3.9
06_01_1009 - 7859357-7859405,7860476-7860660,7860747-7860821,786... 28 3.9
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677... 28 3.9
05_01_0001 + 3358-3774,3878-4086,4420-4493,4925-4935 28 3.9
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 28 3.9
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 5.1
07_01_1196 - 11369673-11369693,11369737-11370270 28 5.1
06_03_0535 + 21897912-21898064,21898151-21898246,21898362-218984... 28 5.1
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 27 6.8
12_02_1163 - 26617450-26617550,26617643-26617744,26618606-26618732 27 6.8
12_02_1015 + 25331667-25332169,25333305-25333406,25333775-253339... 27 6.8
09_05_0003 + 20016534-20016703,20017679-20017915,20018585-200186... 27 6.8
11_01_0066 - 536281-537196,537397-537452 27 8.9
06_01_0724 + 5299278-5299542,5299690-5299950,5300246-5300351,530... 27 8.9
01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679 27 8.9
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Frame = +2
Query: 107 KEKEAQEWIEGVLG----AKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKI-------N 253
+ +A W+E V+G ++ P + F +++G VLC+ INK++PG+VPK+ +
Sbjct: 26 RRHQAATWLESVIGPFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPGAVPKVVANASCDS 85
Query: 254 TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDI 376
F+ ENI NF A++ +P F+ DL EK +I
Sbjct: 86 QPSTAFQYFENIRNFLVAVQELKLP---CFEASDL-EKDNI 122
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Frame = +2
Query: 116 EAQEWIEGVLG-------AKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKI-----NTT 259
EA W+ V+G A+ P E F L++G VLC +NK++PGSVPK+ ++
Sbjct: 58 EAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSA 117
Query: 260 GG----QFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 406
G ++ EN+ NF ++ G+P F+ DL + +VV + +L
Sbjct: 118 DGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDLEKGGKGVRVVDCVLSL 167
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 35.5 bits (78), Expect = 0.026
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +2
Query: 41 QSHNMSLERQVRAKIASKRNPXKEKEAQEWIEGVLGA-------KFPPGELFEDVLKDGT 199
+ H L + A ++ + EA W+ +GA + P E F L++G
Sbjct: 21 RQHGCRLSDRDLASRRAEEAAARRNEAAGWLRRTVGAVAARDLPEEPSEEEFRLGLRNGQ 80
Query: 200 VLCQLINKLKPGSVPK 247
+LC +N++ PG+VPK
Sbjct: 81 ILCGALNRVHPGAVPK 96
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 269 FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 406
F+ EN+ NF A + G+P F+ DL + A+VV+ + AL
Sbjct: 140 FQYFENVRNFLVAAQEIGLP---CFEASDLEQGGKSARVVNCVLAL 182
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 34.7 bits (76), Expect = 0.045
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 158 PPGELFEDVLKDGTVLCQLINKLKPGSVPKI 250
P E F L++G VLC ++N + PG+VPK+
Sbjct: 48 PSEEEFCVALRNGLVLCNVLNHVNPGAVPKV 78
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 34.7 bits (76), Expect = 0.045
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +2
Query: 107 KEKEAQEWIEGVLGAKFPPGELFEDVLKD----GTVLCQLINKLKPGSVPKINTTGGQFK 274
+ E +W+ G+L P + ++ L+D G LC + +KL PG + T GG
Sbjct: 16 RRAEVIDWLGGLLPEFDLPLDSSDEELRDYLINGEALCYVADKLMPGVLE--GTWGGYAS 73
Query: 275 -MMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 406
N+ F S + G+P F DL E+ ++ +V L AL
Sbjct: 74 DQRSNVKKFLSVVAEMGLPG---FGVKDL-EEGSMSSIVECLLAL 114
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 34.3 bits (75), Expect = 0.059
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 107 KEKEAQEWIEGVLGAKFPPGELFED----VLKDGTVLCQLINKLKPGSVPKI-NTTGGQF 271
+ E EW+ +L P + +D +L DGTVLC ++N L PG + +
Sbjct: 16 RRAEVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSD 75
Query: 272 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 406
+ ++ F + + G+P F DL E+ ++ VV L L
Sbjct: 76 QHAGHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCLLVL 116
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 265 TVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRHRPSSQH 393
TV + HHKL Q I R R + +S G+ R + QH
Sbjct: 461 TVNGNNAHHKLYATMQDIAVRRRRAIVQGKSWGKTRSQERQQH 503
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 179 DVLKDGTVLCQLINKLKPGSVPK--INT--TGGQFKMMENITNFQSAIKAYGVPDIDVFQ 346
++++DG +LC+LIN PG++ + INT ++ EN T ++ KA G +++
Sbjct: 161 NLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCTVVNI-G 219
Query: 347 TVDLWEKK 370
T DL E +
Sbjct: 220 TQDLIEAR 227
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 31.1 bits (67), Expect = 0.55
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +2
Query: 167 ELFEDVLKDGTVLCQLINKLKPGSVPK--INTTG--GQFKMMENITNFQSAIKAYGVPDI 334
+LF D+++DG +LC+LIN PG++ + IN ++ EN T ++ KA G +
Sbjct: 161 QLF-DLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVV 219
Query: 335 DVFQTVDLWE 364
++ T DL E
Sbjct: 220 NI-GTQDLVE 228
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 30.7 bits (66), Expect = 0.73
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +2
Query: 53 MSLERQVRAKIASKRNPXKEKEAQEWIEGV---LGAKFPPGELFEDV---LKDGTVLCQL 214
MS A AS + ++ W+ + L PP ED+ L G +LC L
Sbjct: 1 MSSSNNAAAAAASPDPSRRREDVVGWLLALFPDLPLPPPPEATDEDLRAALATGRLLCAL 60
Query: 215 INKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 394
+ +L PG++ +T +N+ F++A++ GV F DL E+ + VV+
Sbjct: 61 LRRLCPGALLDDAST-------DNVGRFRAAVERMGVAK---FSASDL-ERGQMTAVVNC 109
Query: 395 LFAL 406
+ AL
Sbjct: 110 ILAL 113
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 30.7 bits (66), Expect = 0.73
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 188 KDGTVLCQLINKLKPGSVPK--INTTG--GQFKMMENITNFQSAIKAYGVPDIDVFQTVD 355
KDG +LC+LIN PG++ + INT ++ EN T ++ KA G +++ T D
Sbjct: 194 KDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIGCTVVNI-GTQD 252
Query: 356 LWE 364
L E
Sbjct: 253 LAE 255
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 155 FPPGELFEDVLKDGTVLCQLINKLKPGS--VPKINTTGGQF-KMMENITNFQSAIKAYGV 325
F G LFED L+DG +LC++I L + + K+ + K + N T IK G
Sbjct: 406 FTVGNLFED-LQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGF 464
Query: 326 P 328
P
Sbjct: 465 P 465
>11_01_0700 + 5764149-5764979
Length = 276
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 201 TVPSLRTSSNSSPGGNLAPRTPSIHSWASFSXSGLRLEAILAR 73
+ PSLR S+SSP +++ + S S +S S G+R A+ R
Sbjct: 3 SAPSLRKRSSSSPAISMSSTSSSPSSSSSSSMDGVRSSAVWER 45
>10_08_0526 +
18547154-18547197,18547320-18547467,18547558-18547604,
18548216-18548270,18548365-18548403,18548517-18548688,
18549135-18549201,18549378-18549434,18549637-18549873,
18551549-18551629,18551803-18551935
Length = 359
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 259 RWTVQNDGEHHKLPVCNQSIRCTRHRC---VPNRRSMGEKRHR 378
R TV N G ++ + CTRH C VP S G +H+
Sbjct: 135 RSTVSNQGNDREIEISETKGSCTRHLCNISVPLTVSTGSHKHK 177
>09_02_0374 -
8112021-8112820,8112908-8113152,8113256-8113455,
8113584-8114235,8114369-8114661
Length = 729
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = -1
Query: 495 HQKKSRLHSSAGLGPRQGPLHSACL*VSRPRANSVLTTWAMSFFSHRSTVWNTSMSGTPY 316
HQ HSS G+ + PLH+ + SR A V S + W +++ Y
Sbjct: 299 HQDLLASHSSFGVSKLKYPLHTLLVFDSRQHALPVAWIITRSVTKQDTLRWMKALTERIY 358
Query: 315 ALIADWKFVMFSI 277
++ + W+ F I
Sbjct: 359 SVDSTWRIGGFVI 371
>06_01_1009 -
7859357-7859405,7860476-7860660,7860747-7860821,
7860852-7861313,7861411-7861482,7861629-7861775,
7861888-7862043,7862136-7862306,7862505-7862675,
7862763-7862828,7864302-7864387,7864505-7864667
Length = 600
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 177 SNSSPGGNLAPRTPSIHSWASFSXS 103
S SP G LA R+PS HS +S S S
Sbjct: 392 SKLSPNGLLARRSPSFHSRSSLSSS 416
>05_02_0116 +
6773659-6774437,6775103-6775298,6775381-6775565,
6775746-6776079,6776174-6776378,6776692-6776834,
6777081-6777233
Length = 664
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 234 PGFSLLMSWQRTVPSLRTSSNSSPGGNLAPRTPSIHS 124
PG S +S +LR +S P G L+P +P +HS
Sbjct: 8 PGGSSSLSDALAAAALRDKPDSLPPGRLSPVSPLVHS 44
>05_01_0001 + 3358-3774,3878-4086,4420-4493,4925-4935
Length = 236
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 502 RTSSEKVTFAFVSGLGSEAGAAPFRVSVSLTTEGKQ 395
R E+ + +SGLGSEAG A R + ++ G++
Sbjct: 201 RIDLERGLSSMISGLGSEAGHAVVRCPLQISAAGEE 236
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +2
Query: 218 NKLKPGSVPKIN--TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVS 391
N L+ G P++ + G ++ N ++ S Y P + V +W+ + ++S
Sbjct: 490 NDLRSGQSPQLTVYSAGHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILS 549
Query: 392 TLFALGRETYRHAEWSGPCLGP 457
+ L W+ LGP
Sbjct: 550 SAVGLPNVGNHFENWNVGVLGP 571
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -2
Query: 392 C*LLGRCLFSPIDLRFGT--HRCRVHRML 312
C L+ R L P+D+RF + CRVH ++
Sbjct: 476 CELVNRSLVQPVDIRFDSKARACRVHDIM 504
>07_01_1196 - 11369673-11369693,11369737-11370270
Length = 184
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 408 VVRLTDTRNGAAPASDPSPLTNANVTFSDEVL 503
V RL DT A+PA P L++A TFSD V+
Sbjct: 26 VARLVDTL-AASPAGVPVDLSSALYTFSDGVI 56
>06_03_0535 +
21897912-21898064,21898151-21898246,21898362-21898474,
21898590-21898656,21898741-21898833,21898968-21899111,
21899693-21899781,21899910-21900015,21900119-21900206,
21900304-21900422,21900913-21901247,21901824-21901933,
21902070-21902179,21902303-21902413,21902870-21903174,
21903267-21903375
Length = 715
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +2
Query: 224 LKPGSVPKIN--TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTL 397
LK G P++ + G ++ N F +A Y P + V +W+ + ++S+
Sbjct: 478 LKSGQWPQLTVYSAGHSVQVFVNGQYFGNAYGGYDGPKLTYSGYVKMWQGSNKISILSSA 537
Query: 398 FALGRETYRHAEWSGPCLGP---KPADECKRD 484
L + W+ LGP +E KRD
Sbjct: 538 VGLPNVGTHYETWNIGVLGPVTLSGLNEGKRD 569
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 27.5 bits (58), Expect = 6.8
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +2
Query: 155 FPPGE-LFEDVLKDGTVLCQLINKLKPGSVP------KINTTG---GQFKMMENITNFQS 304
FPP L +L DGT++ +++KP +P +I TTG G + M + F +
Sbjct: 650 FPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWA 709
Query: 305 AIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLF 400
A K P I ++++ + D ++ S ++
Sbjct: 710 AYKTDFFPRIFHVESLEKTAQDDFQKLASAVY 741
>12_02_1163 - 26617450-26617550,26617643-26617744,26618606-26618732
Length = 109
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 387 SAHCLPSVVRLTDTRNGAAPASDPSPLTNANVTFSDE 497
SAH P D N A+ PSP TN +SDE
Sbjct: 15 SAH--PQQNETPDQENDASAVVQPSPRTNIGTEYSDE 49
>12_02_1015 +
25331667-25332169,25333305-25333406,25333775-25333919,
25334002-25334186,25334297-25334401,25334507-25334604,
25334686-25334924,25335030-25335123,25335190-25335275,
25335579-25335677,25335804-25335869
Length = 573
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 62 ERQVRAKIA---SKRNPXKEKEAQEWIEGVLGAKFPPGELFEDVLK 190
E++V+ ++ S + +E+EA+ W+E V G + PGE+ +V++
Sbjct: 64 EKKVKVEVVEVDSSSSEEEEREARGWVE-VGGGRRVPGEVVVEVMR 108
>09_05_0003 +
20016534-20016703,20017679-20017915,20018585-20018631,
20018932-20019050,20019128-20019288,20019379-20019488,
20019571-20019670,20019701-20019743,20020375-20020503
Length = 371
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 230 PGSVPKINTTGGQFKMMENITNFQSAI 310
PG + I T GG F ++N + F SA+
Sbjct: 320 PGDLESICTIGGHFVFIDNPSGFHSAV 346
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 431 EWSGPCLGPKPADECKRDFF 490
+W PC+GP A +C+ ++F
Sbjct: 172 KWMKPCIGPVLACDCEPEYF 191
>06_01_0724 +
5299278-5299542,5299690-5299950,5300246-5300351,
5300633-5300697,5300759-5301233,5302239-5302347,
5302432-5302710,5303025-5303231,5303319-5303468,
5304164-5304277
Length = 676
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 211 AHQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHR 336
A + AW D H RWT + + V N++ CT H+
Sbjct: 233 AQPSSAAWSVSHDPHPRWTCKCNPSRVSFSVSNKN-PCTLHQ 273
>01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679
Length = 568
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 297 SSLQSKHTVYPTSMCSKP*IYGRKKTS--PK*SAHCLPSVVRLTDTRNGAAPASD 455
S L + + +S C Y R P+ +A C S++R + GAAPA+D
Sbjct: 59 SKLLASSSSSSSSSCGAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAAD 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,060
Number of Sequences: 37544
Number of extensions: 381151
Number of successful extensions: 1138
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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