Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32049
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 87 9e-18
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 87 9e-18
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 77 8e-15
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 74 7e-14
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 73 2e-13
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 42 3e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 42 3e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 42 3e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 30 1.1
Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical p... 28 3.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 3.4
AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical ... 28 3.4
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 6.0
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine rece... 27 8.0
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 8.0
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 8.0
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 86.6 bits (205), Expect = 9e-18
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Frame = +2
Query: 68 QVRAKIASKRNPXKEKEAQEWIEGVLGAKFPP---GELFEDVLKDGTVLCQLINKLKPGS 238
+ + KI K + E +W++ V G F + V +DG++LC L N LKPGS
Sbjct: 18 EAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGS 77
Query: 239 VPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRET 418
V K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V+ L +L R++
Sbjct: 78 VKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKS 136
Query: 419 YRHAEWSGPCLGPKPADECKRDF 487
++ SG LGPK A +R++
Sbjct: 137 EKNFGRSG--LGPKEAQGDRREW 157
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 86.6 bits (205), Expect = 9e-18
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Frame = +2
Query: 68 QVRAKIASKRNPXKEKEAQEWIEGVLGAKFPP---GELFEDVLKDGTVLCQLINKLKPGS 238
+ + KI K + E +W++ V G F + V +DG++LC L N LKPGS
Sbjct: 18 EAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGS 77
Query: 239 VPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRET 418
V K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V+ L +L R++
Sbjct: 78 VKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKS 136
Query: 419 YRHAEWSGPCLGPKPADECKRDF 487
++ SG LGPK A +R++
Sbjct: 137 EKNFGRSG--LGPKEAQGDRREW 157
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 77.0 bits (181), Expect = 8e-15
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Frame = +2
Query: 80 KIASKRNPXKEKEAQEWIEGVLGAKFP---PGELFEDVLKDGTVLCQLINKLKPGSVPKI 250
K ASK N + EWI + F + F + LKDG LC+L+N +K GSV KI
Sbjct: 20 KQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNAIKAGSVKKI 79
Query: 251 NTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRE 415
F +ENI F +A ++ GV D + FQ+VDL++ +D+ V TL +L R+
Sbjct: 80 MKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARK 134
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 73.7 bits (173), Expect = 7e-14
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +2
Query: 71 VRAKIASKRNPXKEKEAQEWIEGVLGAKFPP-GEL--FEDVLKDGTVLCQLINKLKPGSV 241
VR K SK + EWI+ + G GE F ++LKDGT+LC+ N ++ GS+
Sbjct: 14 VRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGIEAGSI 73
Query: 242 PKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGR 412
K+ F MENI F K GVP+ + FQ+V+L E +D+ V TL +LGR
Sbjct: 74 KKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGR 130
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 72.5 bits (170), Expect = 2e-13
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Frame = +2
Query: 59 LERQVRAKIASKRNPXKEKEAQEWIEGVLGAKFP----PGELFEDV---LKDGTVLCQLI 217
L R+++ K ++ + E +WIE V G +F E DV LKDG +LC+LI
Sbjct: 10 LSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLI 69
Query: 218 NKLKPGSVPKINTTGGQ-FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 394
KL P N F MMENI+NF +A K +GV +I FQTVDL+E K +V+
Sbjct: 70 EKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIEC 129
Query: 395 LFALGRETY-RHAEWSGPCLGPKPADECKRDF 487
L L R + P K A R F
Sbjct: 130 LRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQF 161
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 173 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 337
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 32 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 91
Query: 338 VFQTVDLWEKKDIAQVVSTL 397
+F DL+ +V+ TL
Sbjct: 92 LFTAEDLYYMNGFQKVLKTL 111
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 173 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 337
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 338 VFQTVDLWEKKDIAQVVSTL 397
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 173 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 337
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 338 VFQTVDLWEKKDIAQVVSTL 397
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 185 LKDGTVLCQLINKLKPGSVPKINTTGGQF---KMMENITNFQSAIKAYGVPDIDVFQTVD 355
L DG LC+ INKL P S+ ++T + N+ F + GVP+ + +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 356 LWEKKDIAQVVSTLFALGR 412
+ K++ +V T+ + +
Sbjct: 608 IISKRNPQKVARTVLTVAK 626
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Frame = +2
Query: 113 KEAQEWIEGVLGAK-FPPGELFEDVLKDGTVLCQLINKLKPGSVP------------KIN 253
+E + W+ L P E+ L++G +L +L N P VP + N
Sbjct: 49 EEVRTWLSECLNDDTLVPTTDLEENLRNGVLLARLGNSFAPEVVPEKGIFDIRQEKYRQN 108
Query: 254 TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYR 424
++ +NI ++ A+++ +P+I + +T D++E +++ + V LFAL +R
Sbjct: 109 DATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNM-KTVFCLFALATLLHR 164
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -1
Query: 384 TWAMSFFSHRSTVWNTSMSGTPYAL---IADWKFVMFSIILNCPPVVLILGTEPGF-SLL 217
++AM + + VW +S +GT Y L IADW + + P + T PG S
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADWIDYPSNTTV-APAAPTVTTTTPGTPSTA 436
Query: 216 MSWQRTVPSLRTSSNSSPGGNLA 148
TV + + +SP +L+
Sbjct: 437 APAAPTVTTTTPGTTTSPSAHLS 459
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -1
Query: 384 TWAMSFFSHRSTVWNTSMSGTPYAL---IADWKFVMFSIILNCPPVVLILGTEPGF-SLL 217
++AM + + VW +S +GT Y L IADW + + P + T PG S
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADWIDYPSNTTV-APAAPTVTTTTPGTPSTA 436
Query: 216 MSWQRTVPSLRTSSNSSPGGNLA 148
TV + + +SP +L+
Sbjct: 437 APAAPTVTTTTPGTTTSPSAHLS 459
>Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 384 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 298
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 384 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 298
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 181 CPQGRHCSLPAHQQAEAWL-CPQ-DQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVP 345
C + C +P Q+ + CP + H+ + D + N + RCT HRC+P
Sbjct: 197 CESSKKC-IPLEQKCDGRRDCPDGEDEHQCETECDSKGG-----NATFRCTNHRCIP 247
>AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical
protein Y73B6A.6 protein.
Length = 272
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 244 QDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSM 360
QD + QN +H LP+ IRC RH C ++R +
Sbjct: 147 QDAENLAFFQNVARNHNLPL---PIRCHRHECKSDKRPL 182
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +1
Query: 214 HQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRHRPSSQ 390
H+ + P H+R N G HH P N + RHR R + R R +Q
Sbjct: 51 HRSPGKHIAPARAHNRGQHHNRGHHHG-PPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQ 108
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +1
Query: 214 HQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRHRPSSQ 390
H+ + P H+R N G HH P N + RHR R + R R +Q
Sbjct: 895 HRSPGKHIAPARAHNRGQHHNRGHHHG-PPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQ 952
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 173 FEDVLKDGTVLCQLINKLKPGSV 241
F KDG VL +L N L+PG+V
Sbjct: 157 FIGFFKDGDVLAKLANALEPGAV 179
>U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine
receptor, class sx protein15 protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 385 YLGDVFFLP*IYGLEHIDVGYTVCFDCRLEVCD 287
YL +FFLP IYG+ + G+ + L +C+
Sbjct: 129 YLSILFFLPVIYGVISVIFGFIFLDNAVLSMCN 161
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 491 RKSHVCIRQRAWVRGRGRSIPRVCKS 414
R++HVC R A ++GRG ++ C S
Sbjct: 999 RRTHVCSRLFAEIKGRGATLCGQCPS 1024
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 491 RKSHVCIRQRAWVRGRGRSIPRVCKS 414
R++HVC R A ++GRG ++ C S
Sbjct: 999 RRTHVCSRLFAEIKGRGATLCGQCPS 1024
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,902
Number of Sequences: 27780
Number of extensions: 300134
Number of successful extensions: 981
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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