Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32048
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             30   0.053
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.1  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   8.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   8.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   8.1  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 0.053
 Identities = 9/41 (21%), Positives = 24/41 (58%)
 Frame = +3

Query: 108 EGAAFPPLMTPQTPVNLYRLGICKSFQMKYQSQEELKLGAK 230
           +G+ FPP +T  + +++Y   +C+   + ++ +  ++ G K
Sbjct: 177 DGSIFPPRITKNSTLHVYEKDLCRLLPLSFEKEVTVRGGVK 217


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 220 SFSSSWLWYFIWKLLQIPRRYKLTGVCGVISG 125
           +  SSW W +   ++ +   + +  + GV+SG
Sbjct: 350 AMGSSWQWVYFISMVILGAFFVMNLILGVLSG 381


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 197 PKPRGTKAGSQIICVRV 247
           P PRGTK G    CV V
Sbjct: 71  PSPRGTKWGLGGTCVNV 87


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 197 PKPRGTKAGSQIICVRV 247
           P PRGTK G    CV V
Sbjct: 47  PSPRGTKWGLGGTCVNV 63


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 197 PKPRGTKAGSQIICVRV 247
           P PRGTK G    CV V
Sbjct: 44  PSPRGTKWGLGGTCVNV 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,422
Number of Sequences: 2352
Number of extensions: 10665
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)