Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32048
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical...    27   6.0  
AL032643-2|CAA21661.2|  404|Caenorhabditis elegans Hypothetical ...    27   6.0  

>Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical
           protein C31A11.3 protein.
          Length = 283

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 259 VLLLYP-YTNNLAPSFSSSWLWYFIWKLLQIPRRYKLTGVCG 137
           V  L+P + +N+ P+FS+  +W+F+   + +  +Y L G CG
Sbjct: 108 VASLFPIFYHNIRPTFSNKSIWFFMVSSVLLD-QYILFGYCG 148


>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +3

Query: 240 YGYSNSTFENTKICDSKGWCPFGLMDLSSCFYREY*CGLWFYYHQYQSTSPRNHT*N*VL 419
           YG  ++ F + K+ D   W         S FY E+   +W  ++ Y S    N+T   + 
Sbjct: 67  YGKLDTKFMDVKLGDLPAWMA-RREKTPSAFYNEFMRNIWRVHNLYYSGPVYNNTVKVIF 125

Query: 420 YYVLEYIF 443
            ++  Y F
Sbjct: 126 RFIFAYSF 133


>Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 331 FTVSISVVCGFIITNISPRVHVIT 402
           F +S+ ++CGF++  +SP V + T
Sbjct: 180 FPLSLGLICGFVVATVSPAVGMPT 203


>Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 331 FTVSISVVCGFIITNISPRVHVIT 402
           F +S+ ++CGF++  +SP V + T
Sbjct: 180 FPLSLGLICGFVVATVSPAVGMPT 203


>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 158 VPPGNLQKLPNEVPKPRGTKAGSQIICVRV 247
           +PP    +LP E+ K R    G ++ CVR+
Sbjct: 900 IPPSVFARLPGEITKVRCIPRGEEMPCVRL 929


>AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical
           protein Y73F8A.1 protein.
          Length = 716

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 349 VVCGFIITNISPRVHVI-THRIRFYIMFWNI 438
           + CGFI+  I   +  I  HR+ +   FWN+
Sbjct: 329 IFCGFILYFIFEELFAIGRHRLHYLTQFWNL 359


>AL032643-2|CAA21661.2|  404|Caenorhabditis elegans Hypothetical
           protein Y54E5A.3 protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 151 TGVCGVISGGKAAPSYVSLNSKYLNS*DKGN*LQMYEEDRKLRYSVN 11
           T +CG+   GK   SY  +N   +   ++ + +  YE    L  S+N
Sbjct: 30  TTMCGIELNGKIVSSYNFVNEDIIGDGEQNDKIFTYENYESLEISIN 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,598,815
Number of Sequences: 27780
Number of extensions: 249335
Number of successful extensions: 634
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)