Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32048
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    26   0.20 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   10.0 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   10.0 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   10.0 

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
 Frame = +3

Query: 63  PLSQLFRYFEFNDTYEGAAFPPLMTPQTPVNLYRLGICKSFQMKYQS--QEELKLGAKLF 236
           P +  + Y  +N T     FP   T      +YR+G    F     S  +E   LG K  
Sbjct: 356 PATTNYLYLTYNGTVHDVEFPGXYTMVIGSGVYRIGSSVEFDWCAVSCLRELRNLGRKTI 415

Query: 237 VYGYSNST 260
           +  Y+  T
Sbjct: 416 MVNYNPET 423


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 214 SSSWLWYFIWKLLQ 173
           S+++LW F+ KLLQ
Sbjct: 456 STTYLWEFLLKLLQ 469


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 508 YLX*SPTMHFYFXLPNFILTNQKIY 434
           YL  S T+ FY  L   + T  KIY
Sbjct: 206 YLIFSSTISFYLPLFVMVFTYYKIY 230


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 354 LWFYYHQYQ 380
           +WFYY+ Y+
Sbjct: 436 VWFYYYTYK 444


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 441 KYIPKHNIKPN 409
           KY+P H + PN
Sbjct: 63  KYLPGHKLPPN 73


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 354 LWFYYHQYQ 380
           +WFYY+ Y+
Sbjct: 436 VWFYYYTYK 444


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,488
Number of Sequences: 438
Number of extensions: 3356
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)