Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32045
         (341 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    53   1e-06
UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    38   0.044
UniRef50_A5Z3S2 Cluster: Putative uncharacterized protein; n=1; ...    34   0.72 
UniRef50_A0HAB9 Cluster: Putative uncharacterized protein precur...    33   1.7  
UniRef50_A0G459 Cluster: Transcriptional regulator, LysR family;...    31   6.7  
UniRef50_Q29IL8 Cluster: GA16131-PA; n=1; Drosophila pseudoobscu...    30   8.8  
UniRef50_O77086 Cluster: Guanine nucleotide-releasing factor 2; ...    30   8.8  

>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 30/59 (50%)
 Frame = -2

Query: 208 FRHNPADGSFXXXXXXXXX*TKCPKLRFLLVLSSITIATTSHQ*GKTNLSHDGLNPAHV 32
           F HNP  GSF          T C   RFL     + +    HQ GKTNLSHDGL PAHV
Sbjct: 17  FSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLRHC-HQWGKTNLSHDGLIPAHV 74


>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 37.9 bits (84), Expect = 0.044
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 124 GTAVSDIWFMHSAERPVVRSYH 189
           GTA SD W +H AE+P+VRSYH
Sbjct: 668 GTADSDNWHLHLAEKPMVRSYH 689


>UniRef50_A5Z3S2 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 98

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 121 LVLSSITIATTSHQ*GKTNLSHDGLNPAHVXLLMGEQ 11
           LVL +  +   +    +  LSHD LNPA V LLMGEQ
Sbjct: 32  LVLRTAPLKYPTPTPDRDELSHDVLNPARVPLLMGEQ 68


>UniRef50_A0HAB9 Cluster: Putative uncharacterized protein
           precursor; n=1; Comamonas testosteroni KF-1|Rep:
           Putative uncharacterized protein precursor - Comamonas
           testosteroni KF-1
          Length = 426

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +2

Query: 101 SNTAQYEEEPQFRTFGSCTRPSGRWCEATIRGIMPERL*GRSQ 229
           S + Q  E P   T  S  +PSGRW  A + G+ P RL GR Q
Sbjct: 85  SASGQLTETPM--TGASDPKPSGRWSLAALPGMAPPRLQGRWQ 125


>UniRef50_A0G459 Cluster: Transcriptional regulator, LysR family;
           n=3; Burkholderia|Rep: Transcriptional regulator, LysR
           family - Burkholderia phymatum STM815
          Length = 340

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 93  VAIVILLSTRRNRSFGHLVHALGRAAGGAKLPS-AGLCLNAXKAEASLAESGKDMLTVEP 269
           V++  +L  RRNRS      A+     G +LP+ AG+  NA    A+LA SG    T EP
Sbjct: 270 VSVTTMLVRRRNRSLRPNAEAVWSLFAGRELPAHAGVSANAG---AALAHSGIKGATHEP 326


>UniRef50_Q29IL8 Cluster: GA16131-PA; n=1; Drosophila
           pseudoobscura|Rep: GA16131-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 1196

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 228 SLAESGKDMLTVEPRESGGSKQCDFTSRVXHSKRE 332
           SL   G D L+V  R    + QC F S + HS+ E
Sbjct: 413 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREE 447


>UniRef50_O77086 Cluster: Guanine nucleotide-releasing factor 2;
           n=7; melanogaster subgroup|Rep: Guanine
           nucleotide-releasing factor 2 - Drosophila melanogaster
           (Fruit fly)
          Length = 1571

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 228 SLAESGKDMLTVEPRESGGSKQCDFTSRVXHSKRE 332
           SL   G D L+V  R    + QC F S + HS+ E
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREE 636


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,690,786
Number of Sequences: 1657284
Number of extensions: 5120788
Number of successful extensions: 11805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11803
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)