Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32045
(341 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ438889-1|ABE66441.1| 244|Homo sapiens GLIS family zinc finger... 29 2.9
DQ438888-1|ABE66440.1| 244|Homo sapiens GLIS family zinc finger... 29 2.9
DQ438887-1|ABE66439.1| 244|Homo sapiens GLIS family zinc finger... 29 2.9
DQ438886-1|ABE66438.1| 244|Homo sapiens GLIS family zinc finger... 29 2.9
DQ438877-1|ABE66434.1| 930|Homo sapiens GLIS family zinc finger... 29 2.9
AF091081-1|AAC72950.1| 303|Homo sapiens unknown protein. 29 3.8
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 5.0
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 5.0
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 5.0
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 5.0
>DQ438889-1|ABE66441.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS5 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 195 PRMVASHHRPLGRVHE--PNVRNCGSSS 118
PRMV+ HH P R H P CGS+S
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGSTS 47
>DQ438888-1|ABE66440.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 195 PRMVASHHRPLGRVHE--PNVRNCGSSS 118
PRMV+ HH P R H P CGS+S
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGSTS 47
>DQ438887-1|ABE66439.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS3 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 195 PRMVASHHRPLGRVHE--PNVRNCGSSS 118
PRMV+ HH P R H P CGS+S
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGSTS 47
>DQ438886-1|ABE66438.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS2 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 195 PRMVASHHRPLGRVHE--PNVRNCGSSS 118
PRMV+ HH P R H P CGS+S
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGSTS 47
>DQ438877-1|ABE66434.1| 930|Homo sapiens GLIS family zinc finger 3
transcript variant long T1 protein.
Length = 930
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 195 PRMVASHHRPLGRVHE--PNVRNCGSSS 118
PRMV+ HH P R H P CGS+S
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGSTS 47
>AF091081-1|AAC72950.1| 303|Homo sapiens unknown protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 152 CTRPSGRWCEAT-IRGIMPERL*GRSQPSRIRQGYAHCGAPRVGRL 286
C+RP+GRW + T + P+ L +PSR + C R RL
Sbjct: 170 CSRPAGRWGDLTMLPSPRPQLLPALRRPSRACCAWPTCSPHRPHRL 215
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 186 PSAGLCLNAXKAEASLAESGKDMLTVEPRESGGSKQ 293
P++G+ A +AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 186 PSAGLCLNAXKAEASLAESGKDMLTVEPRESGGSKQ 293
P++G+ A +AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 186 PSAGLCLNAXKAEASLAESGKDMLTVEPRESGGSKQ 293
P++G+ A +AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 186 PSAGLCLNAXKAEASLAESGKDMLTVEPRESGGSKQ 293
P++G+ A +AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,831,986
Number of Sequences: 237096
Number of extensions: 790605
Number of successful extensions: 1374
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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