Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32043
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 196 8e-51
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 195 1e-50
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 194 3e-50
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 3e-38
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 111 3e-25
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 97 5e-21
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 96 1e-20
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 4e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 94 5e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 7e-20
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 2e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 8e-14
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-10
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 4e-04
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 40 9e-04
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 40 9e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.001
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 35 0.025
SB_19231| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 6.6
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 196 bits (477), Expect = 8e-51
Identities = 87/96 (90%), Positives = 89/96 (92%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRAILVDLEPGTMDS
Sbjct: 16 IGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 195 bits (476), Expect = 1e-50
Identities = 86/96 (89%), Positives = 89/96 (92%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDS
Sbjct: 229 IGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDS 288
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 289 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 194 bits (472), Expect = 3e-50
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPR++L+DLEPGTMDS
Sbjct: 16 IGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRSVLIDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 154 bits (374), Expect = 3e-38
Identities = 69/76 (90%), Positives = 71/76 (93%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRAILVDLEPGTMDS
Sbjct: 16 IGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLV 355
VRSGPFGQI R DN V
Sbjct: 76 VRSGPFGQIFRPDNFV 91
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 111 bits (266), Expect = 3e-25
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +2
Query: 251 GKYVPRAILVDLEPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
GKYVPRA+LVDLEPGTMDSVRSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 56
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 97.1 bits (231), Expect = 5e-21
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = +2
Query: 245 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+GG+YVPR+ILVDLEPGTMD+VR GP G + R DN V Q GA NNWAKGHY+EGAE
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAE 67
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 95.9 bits (228), Expect = 1e-20
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + LV G+ A NN+A+GHYT G E
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKE 113
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 445 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 504
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 505 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 546
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 11 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 70
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 71 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 112
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 597 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 656
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 657 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 698
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 76 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 135
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 136 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 177
Score = 56.8 bits (131), Expect = 7e-09
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 524 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 583
Query: 290 PGTMDSV 310
P + +
Sbjct: 584 PTVRECI 590
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 94.3 bits (224), Expect = 4e-20
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N ++ E GK+VPRA+ VDLE
Sbjct: 383 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKHVPRAVFVDLE 442
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 443 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ DLE
Sbjct: 816 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFADLE 875
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 876 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 917
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 93.9 bits (223), Expect = 5e-20
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 113
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 93.5 bits (222), Expect = 7e-20
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 430 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 489
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + Q+ + L+ G+ A NN+A+GHYT G +
Sbjct: 490 PSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKD 531
Score = 89.8 bits (213), Expect = 8e-19
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 301
+G WE+ C EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 302 DSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
D VR+G + Q+ + L+ G+ A NN+A+GHYT G +
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQ 98
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ DLE
Sbjct: 12 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGKHVPRAVFCDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 113
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 73.3 bits (172), Expect = 8e-14
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 215 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKG 394
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+ + L+ G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 395 HYTEGAE 415
HYT G E
Sbjct: 72 HYTVGKE 78
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 72.1 bits (169), Expect = 2e-13
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +2
Query: 236 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+EA+ GKYVPRA+LVDLEP +D VR+G + + + ++ G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 68.9 bits (161), Expect = 2e-12
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P V P + L+ G+ A NN+A+GHYT G +
Sbjct: 72 PTV---VALSP-------EQLITGKEDAANNYARGHYTIGKQ 103
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 60.5 bits (140), Expect = 6e-10
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D + + N +++E GGK+VPRA+ VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGKHVPRAVFVDLE 71
Query: 290 PGTMDSVR 313
P + ++
Sbjct: 72 PSVVGRMK 79
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 140 FWEIICDEHGIDPTGAYHG-DSDLQLERINVYYNE 241
FWE+I +EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.6 bits (98), Expect = 7e-05
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 302 DSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 50
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VR G + + D L+ G+ A NN+A+GHYT G E
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 39.9 bits (89), Expect = 9e-04
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+R+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 266 RAILVDLEPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNW 385
RA+L+D+E G ++++ GP + L+ G GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLER----INVYYNEASGGKY 259
A IG WE+ C EHGI P G H SD +R + +++E + GK+
Sbjct: 207 AGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETASGKH 256
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 362 QXGAGNNWAKGHYTEGAE 415
Q A NNWAKG YTEGAE
Sbjct: 2 QNSAANNWAKGFYTEGAE 19
>SB_19231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 33.5 bits (73), Expect = 0.076
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = +2
Query: 62 FT*IKQNEGNRTYXKLVNAATXIGAKFWEIICDEH-----GIDPTGAYHGDSDLQLERIN 226
FT I + E N +++N +G FW+ D + DP Y G + + +
Sbjct: 459 FTFIYKTEFNNLIIQVINGHEIVGRDFWDNAVDSYVQLKLDPDPGNVYKGKTSISRKTTE 518
Query: 227 VYYNE 241
YYNE
Sbjct: 519 PYYNE 523
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 0.71
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 327 PKGPERTESMVPGSKSTRMARGTYLP--PEA 241
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 238 IVVYIDALQLQVRVPM-VGTGGVDAVLVADDLPEL 137
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 197 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 310
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 158 DEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 292
D G GD L L + +Y E G + V R + LEP
Sbjct: 794 DVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,852,675
Number of Sequences: 59808
Number of extensions: 209652
Number of successful extensions: 549
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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