Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32043
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 192 1e-49
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 184 2e-47
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 181 2e-46
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 181 2e-46
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 177 3e-45
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 176 6e-45
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 124 3e-29
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 124 3e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 96 1e-20
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 96 1e-20
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 94 3e-20
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 94 4e-20
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 94 4e-20
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 93 1e-19
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 92 1e-19
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 92 1e-19
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 92 1e-19
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 92 1e-19
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 92 1e-19
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 91 3e-19
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 91 3e-19
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 83 6e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 82 1e-16
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 71 5e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 71 5e-13
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 31 0.46
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 27 4.3
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 26 10.0
AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 192 bits (467), Expect = 1e-49
Identities = 85/96 (88%), Positives = 89/96 (92%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYVPRA LVDLEPGTMDS
Sbjct: 16 IGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VR+GPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 184 bits (449), Expect = 2e-47
Identities = 81/96 (84%), Positives = 86/96 (89%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+I DEHGI P G Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDS
Sbjct: 16 IGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 181 bits (441), Expect = 2e-46
Identities = 80/96 (83%), Positives = 85/96 (88%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE+I DEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDS
Sbjct: 16 IGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 181 bits (441), Expect = 2e-46
Identities = 80/96 (83%), Positives = 85/96 (88%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE+I DEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDS
Sbjct: 16 IGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 177 bits (431), Expect = 3e-45
Identities = 77/96 (80%), Positives = 85/96 (88%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE+I DEHGI P G + G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDS
Sbjct: 16 IGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 176 bits (428), Expect = 6e-45
Identities = 76/96 (79%), Positives = 85/96 (88%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE+I DEHGI P G + G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDS
Sbjct: 16 IGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGPFGQ+ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 124 bits (299), Expect = 3e-29
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE I +EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P +++
Sbjct: 16 IGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINY 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRS +G++ +N V G+ GAGNNW++G+Y +GAE
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 124 bits (299), Expect = 3e-29
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE I +EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P +++
Sbjct: 16 IGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINY 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRS +G++ +N V G+ GAGNNW++G+Y +GAE
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 95.9 bits (228), Expect = 1e-20
Identities = 39/100 (39%), Positives = 58/100 (58%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G D E ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 95.9 bits (228), Expect = 1e-20
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D+ +E N +++E GK+VPRAI VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + ++ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKE 113
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 95.9 bits (228), Expect = 1e-20
Identities = 39/100 (39%), Positives = 58/100 (58%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G D E ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 94.3 bits (224), Expect = 3e-20
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 292
A IG WE+ C EHG+D G + + + + + +++E+ GK+VPRAI VDLEP
Sbjct: 16 AGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLEP 75
Query: 293 GTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G +G + D ++ G+ A NN+A+GHYT G E
Sbjct: 76 TVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKE 116
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 93.9 bits (223), Expect = 4e-20
Identities = 39/100 (39%), Positives = 59/100 (59%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G S + E ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 93.9 bits (223), Expect = 4e-20
Identities = 39/100 (39%), Positives = 59/100 (59%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G S + E ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G + + L ++ N +++E GK+VPRAI+VDLE
Sbjct: 17 AGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLE 76
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + + + L+ G+ A NN+A+GHYT G E
Sbjct: 77 PTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKE 118
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 92.3 bits (219), Expect = 1e-19
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDL 286
A IG WE+ C EHGI P G YH + D + E IN ++ E +GGK+VPR + VDL
Sbjct: 18 AGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDL 76
Query: 287 EPGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
EP +D VR+G + + + L+ G+ A N +A+G YT G E
Sbjct: 77 EPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGRE 119
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 92.3 bits (219), Expect = 1e-19
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D L + + +++E G++VPRA++VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + + + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 92.3 bits (219), Expect = 1e-19
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D L + + +++E G++VPRA++VDLE
Sbjct: 11 AGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLE 70
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + + + L+ G+ A NN+A+GHYT G E
Sbjct: 71 PTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 112
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 92.3 bits (219), Expect = 1e-19
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D L + + +++E G++VPRA++VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + + + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 92.3 bits (219), Expect = 1e-19
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLE 289
A IG WE+ C EHGI P G D L + + +++E G++VPRA++VDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D +R+G + + + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 91.1 bits (216), Expect = 3e-19
Identities = 37/100 (37%), Positives = 58/100 (58%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G + + ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 91.1 bits (216), Expect = 3e-19
Identities = 37/100 (37%), Positives = 58/100 (58%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G + + ++++ G+YVPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPT 71
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 72 VVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/100 (37%), Positives = 59/100 (59%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPG 295
A IG WE+ C EHGI P G + D + ++++ G++VPR+I VDLEP
Sbjct: 12 AGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPT 70
Query: 296 TMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+D +R+G + ++ + ++ G+ A NN+A+GHYT G E
Sbjct: 71 VVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKE 110
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 82.2 bits (194), Expect = 1e-16
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = +2
Query: 149 IICDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSG 319
+ C EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G
Sbjct: 1 MFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTG 59
Query: 320 PFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+ + + L+ G+ A N +A+G YT G E
Sbjct: 60 TYRSLFHPEQLLSGKEDAANCYARGRYTIGRE 91
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 70.5 bits (165), Expect = 5e-13
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 FWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSG 319
FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP ++ +
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQS 81
Query: 320 P-FGQIXRXDNLVXGQ--XGAGNNWAKGHYTEGAE 415
P F + DN+ GAGNNWA G Y +G E
Sbjct: 82 PNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQE 115
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 70.5 bits (165), Expect = 5e-13
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 FWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSG 319
FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP ++ +
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQS 81
Query: 320 P-FGQIXRXDNLVXGQ--XGAGNNWAKGHYTEGAE 415
P F + DN+ GAGNNWA G Y +G E
Sbjct: 82 PNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQE 115
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 30.7 bits (66), Expect = 0.46
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 124 GCRIDQLGICTISLILFYLCEL*IT*H*KYCYRTLPLHCRL 2
G R+ Q C+ ++ ++++CEL T + CY HC L
Sbjct: 205 GSRVGQWESCSCNVYMYFVCELPPTINDNNCYNNYNNHCYL 245
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 27.5 bits (58), Expect = 4.3
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -2
Query: 315 ERTESMVPGSKSTRMARGTYLPPEASL*YTLMRSNCKSESPW*APVGSMPCSSQMISQNL 136
E + M P KSTR YLPP RS C+ +P P S SQ IS+++
Sbjct: 148 ETSSCMKPREKSTRSQAEVYLPP-----LKRSRSKCQVSAP--QPSNSSLQLSQCISESV 200
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 104 KLVNAATXIGAKFWEIICDEHGIDPTGAYHGDS 202
K + ++T + + + I+C +HG+ G++ G S
Sbjct: 235 KYLKSSTSVDQESYLIVCGDHGMTAAGSHGGAS 267
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 104 KLVNAATXIGAKFWEIICDEHGIDPTGAYHGDS 202
K + ++T + + + I+C +HG+ G++ G S
Sbjct: 235 KYLKSSTSVDQESYLIVCGDHGMTAAGSHGGAS 267
>AC024882-5|AAF60932.1| 666|Caenorhabditis elegans Hypothetical
protein Y9C9A.8 protein.
Length = 666
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 35 VFLVLSNL*FT*IKQNEGNRTYXKLVNAATXIGAKFWEIICDEHGI 172
+ L L N+ F ++ NRTY + T G FW D HGI
Sbjct: 116 LLLTLKNVKFFNTFRDSINRTYGLDADEITFTGCLFWR--TDNHGI 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,515,652
Number of Sequences: 27780
Number of extensions: 149700
Number of successful extensions: 380
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -