Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32043
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   4.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   7.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.7  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 152 ICDEHGIDPTGAYHGDS 202
           +C+   +DP G + G+S
Sbjct: 58  VCNMENVDPLGIHTGES 74


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 197 DSDLQLERINVYYNEASGGKYV 262
           D+ L+   I  Y N+  GG++V
Sbjct: 72  DARLKFSNIAPYLNQIYGGQFV 93


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 90 FPSFCFIYVNYKLLNTKNTATARYHYTV 7
          FPS  FI +NY +    N+      +T+
Sbjct: 11 FPSTSFILINYFIFLYFNSLVRFRRFTI 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,249
Number of Sequences: 438
Number of extensions: 1647
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)