Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32043
(430 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 187 2e-48
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 184 3e-47
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 184 3e-47
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 183 4e-47
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 181 2e-46
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 180 3e-46
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 180 3e-46
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 178 1e-45
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 173 6e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 97 6e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 97 6e-21
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 96 8e-21
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 96 1e-20
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 96 1e-20
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 93 5e-20
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 93 5e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 75 2e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 2e-14
At1g20400.1 68414.m02544 myosin heavy chain-related 30 0.58
At2g34110.1 68415.m04176 hypothetical protein 27 5.4
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 187 bits (456), Expect = 2e-48
Identities = 81/97 (83%), Positives = 90/97 (92%), Gaps = 1/97 (1%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 304
IG+KFWE+ICDEHG+DPTG Y+GDS DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMD
Sbjct: 16 IGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMD 75
Query: 305 SVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
S+RSGP+GQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 SIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 112
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 184 bits (447), Expect = 3e-47
Identities = 79/96 (82%), Positives = 88/96 (91%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE++CDEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YVPRAIL+DLEPGTMDS
Sbjct: 16 IGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VR+GP+GQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 184 bits (447), Expect = 3e-47
Identities = 81/97 (83%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 304
IG+KFWE+ICDEHGID TG Y GD+ DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMD
Sbjct: 16 IGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMD 75
Query: 305 SVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
S+RSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 SIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 112
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 183 bits (446), Expect = 4e-47
Identities = 81/96 (84%), Positives = 87/96 (90%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+ICDEHGID TG Y GDS LQLERI+VY+NEASGGKYVPRA+L+DLEPGTMDS
Sbjct: 16 IGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+RSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 LRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 181 bits (440), Expect = 2e-46
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE+IC EHGID TG GD+DLQLERINVY+NEASGGKYVPRA+L+DLEPGTMDS
Sbjct: 16 IGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+RSGPFGQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 LRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 180 bits (439), Expect = 3e-46
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE++C EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS
Sbjct: 16 IGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+RSGP+GQ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 LRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 180 bits (439), Expect = 3e-46
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE++C EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS
Sbjct: 16 IGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
+RSGP+GQ R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 LRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 178 bits (433), Expect = 1e-45
Identities = 76/96 (79%), Positives = 86/96 (89%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IGAKFWE++C EHGID TG Y G++DLQLER+NVYYNEAS G++VPRA+L+DLEPGTMDS
Sbjct: 16 IGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGP+GQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (420), Expect = 6e-44
Identities = 76/96 (79%), Positives = 85/96 (88%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG+KFWE++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YVPRA+L+DLEPGTMDS
Sbjct: 16 IGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDS 75
Query: 308 VRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
VRSGP+GQI R DN V GQ GAGNNWAKGHYTEGAE
Sbjct: 76 VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 6e-21
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D+ + + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 6e-21
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D+ + + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 8e-21
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G DS + + N +++E S G++VPRA+ +DLE
Sbjct: 12 AGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGRE 113
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G GD + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G GD + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 93.5 bits (222), Expect = 5e-20
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 93.5 bits (222), Expect = 5e-20
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 116 AATXIGAKFWEIICDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLE 289
A +G WE+ C EHGI P G D + + N +++E GK+VPRA+ VDLE
Sbjct: 12 AGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLE 71
Query: 290 PGTMDSVRSGPFGQIXRXDNLVXGQXGAGNNWAKGHYTEGAE 415
P +D VR+G + Q+ + L+ G+ A NN+A+GHYT G E
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++
Sbjct: 17 IGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVING 76
Query: 308 VRSGPFGQIXRXDNLVXGQ--XGAGNNWAKG-HYTEGAE 415
+++G + + +N+ GAGNNWA G H +G E
Sbjct: 77 IQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVE 115
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = +2
Query: 128 IGAKFWEIICDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 307
IG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++
Sbjct: 17 IGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVING 76
Query: 308 VRSGPFGQIXRXDNLVXGQ--XGAGNNWAKG-HYTEGAE 415
+++G + + +N+ GAGNNWA G H +G E
Sbjct: 77 IQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVE 115
>At1g20400.1 68414.m02544 myosin heavy chain-related
Length = 944
Score = 30.3 bits (65), Expect = 0.58
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 364 LSXHQVVRTXD-LSERSRADRVHGAGLQVDEDGAGHVLAAGGFIVVYIDALQLQVRVPMV 188
LS H+ RT D SERS ADR L D AG+ + + L+ ++ P+V
Sbjct: 151 LSDHRRSRTPDGSSERSGADRFRAESLDDDLVEAGYSSSGSSSRTSVVAELRRRISSPLV 210
Query: 187 GTGGVDAVLVADDLPELSSD 128
A P L+ +
Sbjct: 211 DRAETGAAATTTFKPRLTDE 230
>At2g34110.1 68415.m04176 hypothetical protein
Length = 123
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 373 GAXLSXHQVVRTXDLSERSRADRVHGAGLQVDEDGAGHVLAAGGFIV 233
GA L VV + D S R +G+ + D+DG +L GGF++
Sbjct: 29 GAILENIFVVNSRDFSSPER----NGSTVCDDDDGVEEILVVGGFLM 71
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,162,917
Number of Sequences: 28952
Number of extensions: 144331
Number of successful extensions: 381
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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