Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32037
(320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0310 - 16669565-16669822,16670558-16670794 66 6e-12
03_01_0290 + 2246791-2247027,2248089-2248346 64 3e-11
01_06_1794 - 39919363-39920025 29 0.62
09_02_0307 + 7131031-7131326,7131414-7131560,7132579-7132711,713... 28 1.4
03_06_0467 + 34145126-34145187,34145403-34145759,34146161-341462... 28 1.9
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 28 1.9
09_02_0487 + 9828283-9829354,9830436-9830580,9830863-9831153,983... 27 3.3
08_02_0830 - 21617485-21618198 27 3.3
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 27 4.3
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 27 4.3
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 27 4.3
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 26 5.7
08_02_0043 - 11550185-11550418,11551525-11551568,11552134-115521... 26 5.7
02_05_0974 - 33218817-33219634,33220733-33221012 26 5.7
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 26 5.7
09_06_0068 - 20661060-20661506,20662702-20662824,20663513-206637... 26 7.6
09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921 26 7.6
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 26 7.6
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 66.1 bits (154), Expect = 6e-12
Identities = 32/75 (42%), Positives = 48/75 (64%)
Frame = +3
Query: 3 IIPXRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSG 182
II RI++RVEHV+ S+C ++F R +N++L +AKA G+ ++ KRQP PK +V G
Sbjct: 84 IIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPKPGFMVEG 143
Query: 183 TEKPVLLAPIPYEFV 227
+ PIPY+ V
Sbjct: 144 ATLET-VTPIPYDVV 157
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 63.7 bits (148), Expect = 3e-11
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +3
Query: 3 IIPXRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSG 182
II RI++RVEHV+ S+C ++ R +N++L +AKA G+ ++ KRQP PK +V G
Sbjct: 84 IIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPEGPKPGFMVEG 143
Query: 183 TEKPVLLAPIPYEFV 227
+ PIPY+ V
Sbjct: 144 ATLET-VTPIPYDVV 157
>01_06_1794 - 39919363-39920025
Length = 220
Score = 29.5 bits (63), Expect = 0.62
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 75 RVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPI 212
R ++ ++ EA AAG + KRQP PP SG A +
Sbjct: 27 RQQQQQQQQYEAAAAGDKTSAKRQPPPPSRLKKTSGRNDDAATAAV 72
>09_02_0307 +
7131031-7131326,7131414-7131560,7132579-7132711,
7133115-7133207,7133421-7133717
Length = 321
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 102 KEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 230
++A AA + L+ + A G E+P L P+PYE+ A
Sbjct: 77 RKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPYEYPA 119
>03_06_0467 +
34145126-34145187,34145403-34145759,34146161-34146248,
34146361-34146506,34146892-34146936,34147030-34147133,
34147225-34147361,34147651-34147761,34148455-34148664
Length = 419
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 109 PRLPARPST*RDSQLPLKLPTSSVELRNPSYLRLSH 216
P L RP R P+ PT + +++ PS+L L H
Sbjct: 347 PNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLH 382
>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
Length = 99
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 39 VKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQ 146
++ +KCRQD++ VK++ +L+++ A K KRQ
Sbjct: 1 MRQAKCRQDYMAIVKQSRQLIEKLDA--KNEPKKRQ 34
>09_02_0487 +
9828283-9829354,9830436-9830580,9830863-9831153,
9831984-9832032
Length = 518
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 78 VKENERLLKEAKAA--GKTVNLKRQPAPPKAAH-IVSGTEKPVLLAP 209
V+ +++ LK +A G N R P PP+A++ I G P+LL+P
Sbjct: 93 VQPSKKFLKSLEACIPGNCTN-GRLPTPPQASNDIEEGANMPLLLSP 138
>08_02_0830 - 21617485-21618198
Length = 237
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 48 SKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAA 167
S CR D ++R N+R L A +A + ++ ++P P K A
Sbjct: 149 SPCRADSVERWDSNKRPLSRASSAERW-DINKKPRPKKDA 187
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 24 IRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQP 149
I V ++ KC +D++ E L K + GK+V + + P
Sbjct: 421 IPVWYIVGKKCEEDYIVARSAEEALAKAQEKYGKSVEIYQDP 462
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +3
Query: 6 IPXRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 185
+ R + + + + +D E ERL KE +A G+T+ K + + I GT
Sbjct: 106 VAPRAKMNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGT 165
Query: 186 EKPVLLAPIPYEFVA*SPIKYF 251
P+ FV S ++Y+
Sbjct: 166 ---------PFMFVLSSALQYY 178
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 220 SYGIGASKTGFSVPLTMWAALGGAG 146
S + AS TGF VP+ + A+G AG
Sbjct: 86 SISLPASPTGFGVPVALPIAVGDAG 110
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 70 LRESKRMRGY*RKPRLPARPST*RDSQLPLKLPTSSVELRNP 195
LR G R+PRL RP R S P+ LP+ L P
Sbjct: 239 LRRELVTGGRVRRPRLSRRPRPPRRSSSPVPLPSPHRILHRP 280
>08_02_0043 -
11550185-11550418,11551525-11551568,11552134-11552185,
11552911-11553111,11553462-11553539,11553887-11554155,
11554241-11554300,11554433-11554547,11554651-11554710,
11554824-11555002,11555250-11555319,11555838-11555987,
11556108-11556287,11556366-11556449
Length = 591
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 193 GFSVPLTMWAALGGAGCLFRLTVLP 119
GF PLT+WAAL + T+LP
Sbjct: 562 GFRSPLTLWAALKKWFKKLKYTILP 586
>02_05_0974 - 33218817-33219634,33220733-33221012
Length = 365
Score = 26.2 bits (55), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 34 SMSSTPSADKTSLRESKRMRGY*RKPRLPARPST---*RDSQLPLKLPTSSVELR---NP 195
+ +S A + E++R+RG K P P+T R K P SSVE + P
Sbjct: 148 TFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKP 207
Query: 196 SYLRLSHTNS 225
++ L++ N+
Sbjct: 208 AFNNLANANA 217
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 30 VEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAP 155
++ + K +++ K+ KE + LKE KAA + + LK P
Sbjct: 541 IKEEEKKKEKEEKAKQEKEEKAKLKEPKAAEEDLALKEMTGP 582
>09_06_0068 -
20661060-20661506,20662702-20662824,20663513-20663770,
20665635-20666027
Length = 406
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 LKRVKENERLLKEAKAAGKTVNLKRQPAPPKA-AHIVSGTEKPVLLAPIP 215
LK KE + + + V + P PP A A SG K V +AP P
Sbjct: 353 LKNAKERPTMSEVVDVLRRAVQSQPDPPPPPAAAAAASGKGKRVDVAPQP 402
>09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921
Length = 264
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 21 NIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPA----PPKAAHIVSGTE 188
++R++H + + L +KE + L + +AA ++K +PA PP A S ++
Sbjct: 108 SLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPPAAGFGSSDSD 167
Query: 189 KPVLL 203
+L
Sbjct: 168 SSAVL 172
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 42 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 185
K K ++ K+ K+N++ K+ K K K++ KA HI+S T
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQHIMSDT 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,382,589
Number of Sequences: 37544
Number of extensions: 146115
Number of successful extensions: 498
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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