Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32036
         (310 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   1.5  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   2.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           21   7.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 29  INAFLIGNRTFVLQKSKKDLQRYNSYN 109
           I++F    RTFV+    KD+ R+++ N
Sbjct: 104 IDSFYSNQRTFVVISKGKDIFRFSATN 130


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 117 PTLQTKTHYCFTXEIXRVVVPTRA 188
           P L  K HYC +  I   VV  R+
Sbjct: 64  PKLYAKLHYCVSCAIHSKVVRNRS 87


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 241 GYLKIFXTVTGGRASCESAR 182
           GYL +   + GGRA  E+ R
Sbjct: 420 GYLVVLSRLRGGRAPPETER 439


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,088
Number of Sequences: 2352
Number of extensions: 5357
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)