BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32036
(310 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpressio... 27 6.2
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA... 27 6.2
>AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpression
suppressor of ras 4 protein.
Length = 1106
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 140 MRFCLKGGASRCNYCNVVGPF*ISVVQMSGXLLKMH 33
+R CLK S C YCN ++V Q+ L+ H
Sbjct: 1037 VRLCLKSVYSLCLYCNHARRIAVNVKQLVIHLIGQH 1072
>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
protein.
Length = 2171
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 140 MRFCLKGGASRCNYCNVVGPF*ISVVQMSGXLLKMH 33
+R CLK S C YCN ++V Q+ L+ H
Sbjct: 1038 VRLCLKSVYSLCLYCNHARRIAVNVKQLVIHLIGQH 1073
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,707,965
Number of Sequences: 53049
Number of extensions: 226969
Number of successful extensions: 433
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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