Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32033
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001777-1|AAN71532.1|  143|Drosophila melanogaster RH14203p pro...    29   4.9  
AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p pro...    28   8.6  
AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-P...    28   8.6  

>BT001777-1|AAN71532.1|  143|Drosophila melanogaster RH14203p
           protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +3

Query: 168 NKDCSVKSTLILHSLHI 218
           NK+C+ KST ++HS+H+
Sbjct: 71  NKNCTPKSTALIHSMHL 87


>AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p
           protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 490 DVVKXRPVNCNTTHYRANWV 431
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


>AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-PA
           protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 490 DVVKXRPVNCNTTHYRANWV 431
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,610,221
Number of Sequences: 53049
Number of extensions: 272653
Number of successful extensions: 377
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)