Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32032
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0829 - 6254769-6254852,6254940-6255024,6255158-6255245,625... 50 8e-07
12_01_0371 - 2851186-2851491,2851582-2851765,2851967-2852156,285... 41 5e-04
07_03_0171 + 14687791-14687898,14688465-14688550,14689474-146895... 39 0.003
12_01_0169 - 1263679-1264349,1264437-1264641 29 1.7
03_02_0497 - 8891852-8892270,8892368-8892473,8892573-8892911,889... 29 2.2
06_01_0973 + 7530436-7530510,7530566-7531297 29 2.9
08_02_1513 + 27633432-27634226 28 3.9
04_04_0110 + 22840636-22840720,22840958-22841310 28 3.9
12_02_0763 + 22953749-22953884,22955036-22955199,22955695-229563... 28 5.1
04_04_1164 - 31413577-31414080,31414435-31414647 28 5.1
12_01_1065 + 10983528-10983992,10985240-10985293 27 6.8
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362... 27 6.8
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 27 6.8
08_02_1623 - 28314402-28315094 27 6.8
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 27 6.8
05_01_0107 + 706936-707202,707231-707485 27 6.8
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 27 6.8
01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660 27 6.8
12_01_0317 + 2417147-2417587,2417622-2418134 27 8.9
09_04_0504 + 18180321-18181013 27 8.9
08_02_0998 - 23411422-23411649,23411897-23412625 27 8.9
05_02_0049 - 6083364-6084111,6084140-6084246 27 8.9
03_01_0619 + 4556665-4557132 27 8.9
>06_01_0829 -
6254769-6254852,6254940-6255024,6255158-6255245,
6255344-6255407,6255496-6255576,6256709-6256781,
6256871-6257385,6258168-6258284
Length = 368
Score = 50.4 bits (115), Expect = 8e-07
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 193 PTSLAPREIFTMEHREKLCSVLPARAQGYMWSLAFSTSQHGFSLASMYRKMQRVDSPVLL 372
P P + + R L + LP QG W L +ST +HG SL+++YR+ LL
Sbjct: 176 PAMSEPSMLLSETMRTVLYTSLPVLVQGRNWMLVYSTWRHGISLSTLYRRSMLCAGYSLL 235
Query: 373 VIQDTDNNVFGAMTSCALH--XSEHFYGXGESFLYS 474
++ D VFG + L + + G F+++
Sbjct: 236 IVGDRKGAVFGGLVEAPLQPLIKKKYQGTNNCFVFT 271
>12_01_0371 -
2851186-2851491,2851582-2851765,2851967-2852156,
2853375-2853613,2853862-2853947,2854720-2854827,
2854929-2855031,2855152-2855213
Length = 425
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 283 WSLAFSTSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHXSEHFYGXGES 462
W L + +S HG S + + D+ +++++DT+ VFG S FYG ++
Sbjct: 242 WRLLYHSSLHGQSFNTFLGNVTNGDAQTVIIVKDTEGFVFGGYASHPWERHSDFYGDMKT 301
Query: 463 FLY 471
FL+
Sbjct: 302 FLF 304
>07_03_0171 +
14687791-14687898,14688465-14688550,14689474-14689546,
14689661-14689741,14690010-14690073,14690673-14690760,
14690843-14690927,14692190-14692228
Length = 207
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +1
Query: 301 TSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHXSE--HFYGXGESFLYS 474
T +HG SL +++R+ + + P LL++ D VFG + + L +E + G ++F+++
Sbjct: 66 TWKHGTSLRTLFRRSENLQGPCLLIVGDMRGAVFGGLLNGPLRPTEKRKYQGTNQTFVFT 125
>12_01_0169 - 1263679-1264349,1264437-1264641
Length = 291
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 263 LALRGTCGRSRSAPASTGSRSPPCTARCSASTVPCSSSYRTPITTCLGP*RHVL 424
L LR S PA+ TA C+A+T+P + S + TCL P H L
Sbjct: 10 LLLRIVASAPASLPATALFVLGDSTASCAATTLPINLSLTSSSGTCLFPSAHRL 63
>03_02_0497 -
8891852-8892270,8892368-8892473,8892573-8892911,
8893065-8893415
Length = 404
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 290 SRSAPASTGSRSPPCTARCSASTVPCSSSYRTPITTCLGP*RHVL 424
+ + +S GS +P T RC C T + LGP RHV+
Sbjct: 162 AEAVASSRGSVAPAPTCRCEMQLPKCDHVGSTAVVAVLGP-RHVV 205
>06_01_0973 + 7530436-7530510,7530566-7531297
Length = 268
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 272 RGTCGRSRSAPASTGSRSPPCTARCSAS 355
+G GR P G+ SPPC+ CS S
Sbjct: 203 KGRGGRVGGPPPPRGTASPPCSHPCSCS 230
>08_02_1513 + 27633432-27634226
Length = 264
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 169 PSTWSSCRPTSLAPREIFTMEHREKLCSVL-PARAQGYMWSLAFSTSQHGFSLASMYRKM 345
PS WS+C + R E E++ + PA A Y SL G A+ +K
Sbjct: 165 PSRWSTCVARAFRNRTRVACEDAEEIAAASPPALAHLYCSSLPSKDLHDGGETAARVQKQ 224
Query: 346 QRVDSPVLLVIQDTDNNVFGAMTSC 420
R + ++D +F + C
Sbjct: 225 LRTLGDTIQRLEDGLELLFRRLVHC 249
>04_04_0110 + 22840636-22840720,22840958-22841310
Length = 145
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 278 TCGRSRSAPASTGSRSPPCTARCSASTVPCSSSYRTPIT 394
T +A A+TGSR P CT C PCS R ++
Sbjct: 83 TTEMGNAAEAATGSRLPDCTHACG----PCSPCRRVMVS 117
>12_02_0763 +
22953749-22953884,22955036-22955199,22955695-22956307,
22968553-22968874,22969107-22969373,22969692-22970460
Length = 756
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 135 ELRRALYSSGASVDMEFLPPDLIGATGNIHHGTQGEV 245
EL A+Y DME LP DLI G HG G++
Sbjct: 477 ELSSAVYDKFWRFDMEALPADLI-RRGMAFHGEDGKL 512
>04_04_1164 - 31413577-31414080,31414435-31414647
Length = 238
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 272 RGTCGRSRSAPASTGSRSPPCTARCSASTVPCSSS 376
R T GRS +A A+ GS P ++ SAST SSS
Sbjct: 122 RATAGRSAAAAAARGS--PATSSSSSASTSSSSSS 154
>12_01_1065 + 10983528-10983992,10985240-10985293
Length = 172
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 249 QRATGSRSGVHVVARVQHQPARVLAR 326
+ +GS S VHV A V HQPA + R
Sbjct: 28 KECSGSGSVVHVTAVVPHQPATLYRR 53
>12_01_0461 +
3618414-3618782,3619664-3619794,3620177-3620294,
3620602-3620654,3620758-3620807,3620912-3621010,
3621511-3621620,3621773-3621900,3622071-3622161,
3622610-3622693,3622863-3623083,3623449-3623527,
3624134-3624283,3624326-3624470,3624604-3624983,
3625096-3625197
Length = 769
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 461 DSPXP*KCSDXCRAHDVMAPNTLLSVSCMTRSTGLSTR 348
D P P KC C +H +A N S+ C S G ++
Sbjct: 344 DPPVPDKCDRLCVSHIEVAWNLAHSIGCSVFSGGSDSK 381
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 206 RHGKYSPWNTGRSCAACYRLALRGTCGRS--RSAPASTGSRSP 328
+ G + N+G S ++ + L+ CG S R+A STG SP
Sbjct: 12 KFGAFVDKNSGASSSSAADIELQNMCGTSVARTASLSTGRASP 54
>08_02_1623 - 28314402-28315094
Length = 230
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 227 WNTGRSCAACYRLALR---GTCGRSRSAPASTGSRSPPCTARCSASTVPCSSS 376
+NT A Y A R G C R A+ + +PP A S +T PCS++
Sbjct: 84 FNTALDAARAYDSAARALYGDCARLNLLLAAATAGAPPAAATPSVAT-PCSTN 135
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 QRATGSRSGVHVVARVQHQPARVLARLHVPQ-DAARRQS 362
Q A G+R G V +VQ P ++ARL+ PQ +A RQ+
Sbjct: 391 QLAIGNRDGKVYVWKVQTSPPVLIARLNNPQVKSAIRQT 429
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -1
Query: 405 PKHVVIGVLYDEEHGTVDALHLAVHGG---EREPVLAGAE-RERPHVPLSASR*HAAQ 244
P+HV++ + DEE G + A HGG PVL + E+ P AS+ AA+
Sbjct: 108 PRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKDKAAK 165
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 27.5 bits (58), Expect = 6.8
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +1
Query: 163 GPPSTWSSCRPTSLAPREIFTMEHREKLCSVLPARAQGYMWSLAFSTSQHGFSLASMYRK 342
GPP T + +LA + + R +C ++ A ++S FS S G +A +++K
Sbjct: 223 GPPGTGKTSLCKALAQKLSIRFKSRYSMCQLIEVNAHS-LFSKWFSES--GKLVAKLFQK 279
Query: 343 MQRV---DSPVLLVIQDTDNNVFGAMTSCALHXSE 438
+Q + +S ++ V+ D ++ A A+ SE
Sbjct: 280 IQEMVEEESNLVFVLIDEVESL-AAARQAAISGSE 313
>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
Length = 111
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 411 HGPK-HVVIGVLYDEEHGTVD 352
HGP H ++G +D+EHG +D
Sbjct: 91 HGPTWHCIVGRNFDKEHGGID 111
>12_01_0317 + 2417147-2417587,2417622-2418134
Length = 317
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 284 GRSRSAPASTGSRSPPCTARCSASTVPCSSSYRTPITTCLGP 409
G + +AP+ST +R + ST+ ++SYR + + P
Sbjct: 23 GAACTAPSSTRTRRGSAAVQAQPSTLSVTASYRVALASSSSP 64
>09_04_0504 + 18180321-18181013
Length = 230
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 218 YSPWNTGRS---CAACYRLALRGTCGRSRSAPASTGSRSPPCTARCSASTVPCSSS 376
Y+ +NT + C +C R +G G R+ P GSR ++ +A+ SSS
Sbjct: 57 YNNYNTSQPRHFCKSCRRYWTKG--GSLRNVPVGGGSRKSSTSSSSAAAAAASSSS 110
>08_02_0998 - 23411422-23411649,23411897-23412625
Length = 318
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 348 LHLAVHGGEREPVLAGAERERPHVPLSASR*HA 250
L LA REPV+ GA HV L+ + HA
Sbjct: 56 LRLAAPPARREPVVVGAAAVAEHVALADAHEHA 88
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 266 ALRGTCGRSRSAPASTGSRSPPCTARCSASTVPCSSSYRTPI---TTCLGP*RHVLY 427
A R TC +R+APAS SR TA + S+ P S S I T P + V+Y
Sbjct: 74 AARSTCSTARTAPASP-SRPSKLTA-LNLSSSPTSPSLTDSIQLTVTAKNPNKKVVY 128
>03_01_0619 + 4556665-4557132
Length = 155
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 242 SCAACYRLALRGTCGRSRSAPASTGSRSPPCTARCSASTVPCSSSYRT 385
+C C R G +A AS+ PP AR +A P +SS T
Sbjct: 20 TCNWCLRADQGSDGGGGGAAAASSSMARPPTGARAAAGGDPAASSRST 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,884,642
Number of Sequences: 37544
Number of extensions: 353555
Number of successful extensions: 1410
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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