BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32027
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 26 0.66
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 6.1
AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 23 8.1
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 8.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 8.1
AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase p... 23 8.1
AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein. 23 8.1
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.2 bits (55), Expect = 0.66
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 326 LVGLNGCGKSSLLAAL 373
LVG NG GKS++LAA+
Sbjct: 112 LVGKNGSGKSAILAAM 127
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.0 bits (47), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 366 ASNDDFPHPLSPTSPYLRPQ 307
ASN D P ++ T YL+P+
Sbjct: 1142 ASNVDVPSTIAETDEYLQPK 1161
>AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein.
Length = 94
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 351 FPHPLSPTSPYLRP 310
F +PLSP SP RP
Sbjct: 26 FANPLSPNSPAERP 39
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 134 PSAHGLXLDIPLVPIPFSSSFVT-RTTG 54
PS+ D+P PIP S S T TTG
Sbjct: 670 PSSRDRPKDLPPPPIPASGSSSTGNTTG 697
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 326 LVGLNGCGKSSLLAAL 373
+ GLNG GKS++L ++
Sbjct: 30 ITGLNGTGKSNILDSI 45
>AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase
protein.
Length = 557
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 237 ISLERGCTASDPVQERASEFIFASASSLRHNASSAV 130
I+LE G + + F+F +ASS HN +
Sbjct: 238 IALEAGDDVDVIIGGHSHSFLFPNASSKPHNQQDTI 273
>AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein.
Length = 557
Score = 22.6 bits (46), Expect = 8.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 237 ISLERGCTASDPVQERASEFIFASASSLRHNASSAV 130
I+LE G + + F+F +ASS HN +
Sbjct: 238 IALEAGDDVDVIIGGHSHSFLFPNASSKPHNQQDTI 273
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,906
Number of Sequences: 2352
Number of extensions: 9138
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -